Papaver somniferum (opium poppy): 113342319
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Entry
113342319 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113342319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113342319
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113342319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_16
Motif
Other DBs
NCBI-GeneID:
113342319
NCBI-ProteinID:
XP_026442681
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MKSSQTTSLKRRFHQSSSNDKGSRRKTDAVDHSDPFSIPNLKEELDKDRYGSVTKDIEAL
LARKRELFSPLQEIYFGHTVKSAAESPISGLDGNINLACQSTIDLDSENEVDVPAAICAE
RTQTHSSRGIFLMPRSNNALVTFCTDAENGDQIVQKPDYSHDPNHRCLQMSSTEQQVGSQ
IQTRYHAKQEHGRNSTTQSDNQGIEPVGAQKKPHYDSQSIFLKKPDGENPAKDVLGSDQR
NRKVEKEGDRGNCGETPIEKSKGVYVGVQDDLMSSSQRSGHSGEDDGLGEIWKEMSLAIE
CSKDSSLPLSTAIEHTAAEEEGEEECEHSFILKDDLGYFCRICGVVEKRIEQIIDFQWGK
GPKTTRYSYMSQSRNVKDGKQVEGSKLTVQNLMDQDFGVADISVHPRHMKQMKPHQLEGF
NFLLGNLVCDSPGGCILAHAPGSGKTFMVISFLQSFLAKYPDARPLVVLPKGILGTWKRE
FKRWQVEDIPLYDLYSSKVDSRAEQLAVLKQWVERRGIMFVGYQQFAIIISNSTSSTAAA
ACHEILLKVPTLLILDEGHTPRNESTDLLYSLSQVQTPRKVVLSGTLFQNHVKEVFNILN
LVRPKFMKLDTSKAAVRRVMSRVQIGPRKQINKSGGAGTLFYDLVEETLENDQDFRRKVT
VIQDLREMTSKVLHYYKGDFLDELPGLVDLTVVLTLSANQKLAVQKLKKLEYFKRSSMGS
AVYVHPQLKEFSESYATGDRGQINEAKIDELLSKLDVADGVKAKFFLTILGLCESAEEKL
LVFSQYRLPLKFLERLVVQTKGWSLGKEIFCISGDSSQDQRELSMDRFNTSQDAKVFFGS
IKACGEGISLVGASRLLILDIHLNPSITRQAIGRAFRPGQTKKVYAYRLVAADSPEEEDH
DICFRKELISKMWFEWSEICGYHDFSMEEVDKKDLGDAFWNSCSFGEDVKALYRR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaagccagactacttctcttaaaagaagatttcaccaatccagctctaatgat
aaaggttcaagaagaaaaactgatgctgttgatcattctgacccattctcaataccgaat
ttgaaggaagaattggataaagatagatatggtagtgtcacaaaggatattgaagctctc
cttgctaggaaaagggagttattcagtcctcttcaggagatatattttggtcatactgta
aaatctgcggcagaatctccaataagtggcttagatggaaacattaacttggcatgtcaa
agcactattgatttggatagtgaaaacgaggttgatgttccagcagctatttgtgctgaa
agaacgcaaacgcacagcagtcggggtattttcctcatgccaagaagtaataatgcactg
gtaacgttttgcacagatgcagaaaatggagaccagattgtacagaagcctgattacagc
catgatcccaatcaccgttgccttcagatgtctagtactgaacaacaagtaggatcgcaa
atccagactcgataccatgcaaaacaagagcacggaaggaattccaccactcaaagtgat
aatcaagggattgaacctgttggagcacagaaaaagcctcattacgactcccagtctatc
tttttgaagaagccagatggcgaaaacccagcaaaagatgtacttggaagtgatcagcga
aatagaaaagttgagaaagaaggggatcgaggtaattgtggcgaaacaccaattgagaaa
tcaaaaggtgtatacgttggtgttcaagatgatctaatgagcagctctcagaggagtggt
catagcggtgaagatgatgggctaggagagatatggaaggagatgtctttagcaatagag
tgttccaaggattcttccttgcccctgagtactgctattgaacatactgcggcagaagag
gagggagaagaagaatgtgaacactcttttattctcaaggatgatctggggtatttttgt
aggatatgtggagtggttgaaaaacgcattgaacaaataattgacttccagtggggaaag
ggaccaaagactaccagatatagttacatgtctcagtctcgtaatgtgaaggatggcaaa
caagttgaaggatccaagcttactgttcagaatttaatggatcaagattttggtgtagct
gacatatccgtgcatccaaggcacatgaagcaaatgaagcctcatcaacttgaaggtttc
aacttcttgcttgggaatttagtatgcgatagtccaggtggttgcattttggcacacgcg
ccaggatcaggaaagacatttatggttataagctttttgcaaagcttcctggccaaatac
cctgatgccagaccacttgtagtgttacccaaaggaatcctgggtacttggaagagggag
tttaaaagatggcaggttgaagatatccccttgtatgacttgtatagttcaaaagtagat
agtcgagcagaacagttggctgtcttaaaacaatgggtggaacgcagaggaatcatgttt
gttggatatcaacaatttgcaatcatcatatccaatagtacaagcagcactgctgcagca
gcctgccatgagatactccttaaggttcctactttacttattctggatgagggtcataca
cctaggaacgagagcacagatctgctctattctctttcacaggttcaaactcctcggaag
gtagtattatctggcaccttatttcagaatcacgtgaaagaagtttttaacattttgaat
cttgtgcgtcccaaatttatgaagctagatacatcgaaggctgctgtgagaagggtaatg
agcagggttcaaattggtcccagaaagcagattaataagagtgggggagcaggcacactg
ttctatgacttagttgaagagaccctagaaaatgaccaagatttccgaaggaaagtcaca
gtgatacaagacttacgagagatgacaagcaaggttttacactactataaaggtgatttt
cttgatgaacttccaggtctcgtagatctgactgtagttctcactctcagcgccaatcag
aaacttgcagtgcaaaaattgaaaaaattggagtacttcaagagaagttccatggggagt
gcagtatatgtgcaccctcagttgaaagaattctctgagagttatgccaccggagacaga
ggacagattaatgaagctaagattgatgagctacttagcaaactagatgttgccgacggt
gtcaaagcaaagtttttcttgactattttggggctttgtgaatctgctgaggaaaagctg
ctagttttcagtcaatatcgccttccacttaaatttttggaaaggctagtggtgcaaact
aagggttggagccttgggaaggaaatcttttgcatttcgggcgactctagtcaagaccag
agagaattgtcaatggatcgtttcaacacttcacaagatgcaaaagtcttctttggctcc
ataaaggcatgtggggagggaatctctcttgtcggggcatctcgcttactgattttagac
attcatctcaatccctcaattactcgacaggctattggtcgtgcatttcgacctggtcaa
acaaaaaaagtgtatgcttataggttggttgcagcagactcacccgaggaggaagaccac
gatatatgcttcaggaaggagttaatttcgaagatgtggtttgagtggagtgagatatgt
ggttaccatgacttttcaatggaagaagttgataaaaaggacttgggtgatgcgttctgg
aatagctgttcctttggtgaagatgtgaaagctttgtacagaaggtga
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