Papaver somniferum (opium poppy): 113343319
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Entry
113343319 CDS
T05758
Name
(RefSeq) ribosome biogenesis protein bms1-like isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113343319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113343319
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
GTPase
113343319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
GTP_EFTU
AAA_14
AAA_22
AAA_16
ATPase_2
AAA
DUF815
PduV-EutP
LHH
Motif
Other DBs
NCBI-GeneID:
113343319
NCBI-ProteinID:
XP_026443333
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MAIASSSSGNHVLCGVSYLKVFKTSPEVSAAGLQSQAAATTTNEQKDTAASIQLTDEVEE
EEPPPYVIVVQGPRKVGKSLLIRSLVEHYTEENLDLVCMRGPFTVISGGQRRIQFVECPN
SFNGMLDAAKYADAVILLIDAYVGFELETLEFVSALRVHGMPNVTGVLTSLDMFENVGEQ
TKTKERLMNHFHAEIFEGARLFCLSGLEHGMYPEHEICDLASFISFMDFHPLSWDIVLYG
YLRGCDIKKGAKVHIAGVGDFPLLGVTSLVDPFPLLAGPKRKRSRKGIEHDESNGFRSGS
YLRLEVRDVPFEIIENYDPYHPILVGGISPGEENAGYMQKDTAATDVTVEEEQPPYVIVA
HGTRKVGKSLLIRSLVEHYTKENLCLVNTRGPVTTISGDLRRIQFVECPNNVNGMLDAAK
YADTVILLINTYIGFEMETFKFVNILRVHGMPKVLGVLTSLDLCKNVEKLTRTKEYLVNH
FCTEIYEGARVFCLSGLEHGMYPKHEILDLASFISVMEFHPLSWRAAQPYVLVDRYEDVT
LPERVLMDNRCNRDIVMYGYLRGCDIKKGTKVHIAGVGDFPLFDVTSIDDPCPLLAAHRR
KSSQEGKEQDENSGFRPGTYLRLEVQDVPLEMVGKIDPYHPILVGGISPGEENVGYMQAT
LKRHTWHRKLLKTRDPIIVSIGWRRYQTTPIYAMEDHSERLRMLNYTPVDTQCLAMFWGP
LASPNTGVVVLQYLPDNKASFRILATAVVVEFNDAAKILKKCKRSGTPWKVSGKTALIKD
LFGSDHEIDKFKGAKLWTESGIQVKVEKAAEKVFVGRSRRKEGLLREGIAKCSFKGRICM
RDTIFLRVWKEIEVPRFFNPVVPMPGLSDGAEEFPKAVLFEHENYQKSTIGRRMLAFVDG
EPSFQDRAHAKNFELHHCDKEEQTEFEKHPMLVISKEEEMLEMHERKESMKKYQPKPRTQ
WSMDERFWRCSKDFHGDKTPTYLTFF
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcaattgcttcttcttcttctggtaatcatgtgttatgtggcgtaagttatcttaaa
gtatttaaaaccagtccagaggtatctgctgctggattacaatctcaagcagcagctact
actacaaatgagcagaaagatacagctgcttctattcaacttactgatgaagtggaagaa
gaggaaccacctccttatgttattgttgtccaaggacctcgcaaggttgggaagtccctg
ttgattaggtcactggtagagcattacaccgaggaaaatcttgatttagtatgcatgcga
gggccctttaccgtcatatcaggtgggcaaagacggatacagtttgtggagtgtccgaat
agttttaatggtatgcttgatgctgcaaagtatgcggacgctgtgatattactcattgat
gcatatgttggctttgaattggaaacacttgagtttgttagcgcgttacgagttcacggc
atgccgaacgttacgggggtgctgacatctcttgatatgttcgaaaatgtaggagaacaa
acaaaaaccaaagaacgcctcatgaatcatttccatgctgaaatatttgaaggagcaaga
ctattctgtttatctggactcgaacatgggatgtacccggagcatgaaatttgcgatctg
gcaagcttcatatcgtttatggatttccaccctttgtcatgggacattgttttgtatggt
tatctccgaggttgtgatatcaagaaaggagctaaggtgcacattgctggtgttggtgat
ttccctctattaggtgtaacaagcttagtcgatcctttccctttactggctggtcccaaa
aggaagagatctcggaaaggaatagagcatgacgagagcaacggtttcagatcagggtct
tatctaaggttggaggtccgagacgttccttttgagattattgaaaattatgatccttat
catcctattctcgttggaggcatcagtcctggagaagagaatgctggatatatgcagaaa
gatacagctgctactgatgttacggtggaagaagaacaacctccatatgttattgttgcc
catggaactcgcaaggttgggaagtccctattgattaggtcactagtagagcactatacc
aaggaaaatctttgtttagtaaacacgcgaggcccagttacgaccatatcaggtgacctc
agacgaatacagtttgtggagtgcccgaataatgttaatggtatgcttgatgctgcaaaa
tatgccgacactgtcatattacttattaatacatatattggttttgaaatggaaacattc
aagtttgtgaacattttacgagttcatggcatgccgaaggtcttgggggtgctgacatct
cttgatttgtgcaaaaatgttgaaaaactaacaagaaccaaagaatacctcgtgaatcat
ttctgtactgaaatatatgaaggagcaagagtattctgtttatctggactcgaacacgga
atgtacccgaagcatgaaattcttgatctggcaagcttcatatctgttatggaatttcat
cctttgtcatggcgagctgcacaaccttatgtgttggtagaccgttatgaagatgtcact
ctgccagaaagggtgctgatggataacagatgcaatagggacattgttatgtatggttat
cttcgaggttgtgatatcaagaaaggaactaaggtgcacattgctggtgttggtgatttc
cctctatttgatgtaacaagcatagacgatccttgccctttactggctgctcatagaagg
aagagctctcaggaaggaaaagagcaggatgagaactcgggtttcagaccagggacttat
ctaaggttggaggtccaagatgttcctctcgagatggttggaaagattgatccttatcat
cctattcttgtcggaggtatcagtcctggagaagaaaatgttggatatatgcaggcgaca
cttaagcgacatacttggcacaggaaattgttgaagacaagagaccctatcattgtttcg
attggttggaggcggtaccagacgacccctatatatgccatggaggatcacagtgagcgg
cttcgaatgctcaattatacccccgtagacacgcagtgtcttgcaatgttttggggccct
ctggcatcccccaatactggagttgttgttttgcagtatctgcctgacaataaggcatct
tttcgtattttagcaactgccgttgtagttgaatttaacgatgctgcaaagatattaaag
aaatgcaagcggtctggaactccttggaaggtctctgggaagactgctcttattaaggat
ctttttggatcagatcatgaaattgataagtttaaaggtgcaaaactttggactgagagc
ggaattcaggtaaaggttgaaaaggctgcagaaaaagtgttcgtggggagatcgagaagg
aaggaggggctacttagagaagggattgctaagtgctcgtttaagggcagaatttgcatg
agggataccattttcttgcgtgtgtggaaagaaattgaggttcctcgtttcttcaaccca
gttgtacctatgcctggtttatcggacggggctgaggaattcccaaaagcagtgttattc
gaacatgaaaattatcagaagtcaactattggacggcgtatgctggcctttgttgatgga
gagcctagctttcaagatcgagctcatgctaagaattttgagttgcatcattgtgataaa
gaggagcagacagaattcgaaaaacatccaatgctggtgatttcaaaggaagaagagatg
ctagaaatgcacgagagaaaggagagtatgaagaaataccaaccaaagcctaggacacaa
tggtcaatggatgaacggttctggcgttgctcaaaagatttccatggagataaaactccc
acttatcttaccttcttttga
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