Papaver somniferum (opium poppy): 113344012
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Entry
113344012 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113344012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113344012
03009 Ribosome biogenesis [BR:
psom03009
]
113344012
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113344012
Spliceosome [BR:
psom03041
]
Complex A
U1 snRNP components
U1 related factors
113344012
Complex B
113344012
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Helicases
113344012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
113344012
NCBI-ProteinID:
XP_026443869
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MNNRFDNRFNDPNSYRDRRSGLMPPAPGPQQYTSYVPPPANTAPVGYLPYGGGYSSGRGA
GSSNCYHHSGGRGGFETGRGGGSGGRGRFLDREDRGGGRGYGTGGGGRGFDFGRGGGGER
TRQELNNAALLNPVEKNLYIESPSVQAMSDYEVVSYRSRRDITVEGHDVPKPIQSFQEAN
IPSFLLDVIHRLGFAEPTPIQSQGWPMALKGRDFIGIAETGSGKTLAYMVPGIVHVSGQP
RLKQGDGPVVLVLAPTRELAVQIQEETSKFIGKSHIRSTCIYGGAPKGQQIRALRTGVEI
VIATPGRLIDMLDSGHTNLSRVTYLVLDEADRMLDMGFEPQIRQIVSQMRTDRQTLYWSA
TWPKEVEKLAKQFLHNPYKVIIGSPDLKANMSITQVVDVVTDMEKYSRLMKLLQEQMDGS
RILIFLETKKGCDQVTRKLRMDGWPALSIHGDKSQEERDFVLAEFKSGRSLIMTATDVAA
RGLDVKDIKCVINYDFPKCLEDYIHRIGRTGRAGAKGKAFTFLTDKNAKIAKELTKILRE
AGQVVSPSLAALARSSYTSYSGGGSARSFRQMGRGGHSFGSRSGSNTIPLGTKRKW
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccgttttgataacagattcaatgatcctaactcttaccgcgatagaagaagc
ggcctaatgcctccagcaccggggccacagcaatatacgtcgtacgttcctcctcccgcg
aatacggctcctgttggatatctaccatatggaggaggatattcttctggaagaggtgct
ggtagttcaaattgttatcatcattctggtgggagaggaggatttgagacaggtagaggt
ggtggtagtggaggaagaggaagattcttggacagagaagacagaggcggtggacgaggt
tatgggacgggtggtggtggtagagggtttgattttggccgtggaggtggtggtgaaagg
acaagacaagaattgaataatgctgctcttttaaatcctgtagagaaaaacctctacata
gagagtccttctgtccaagcaatgtctgattatgaagttgtaagctatcgttcaaggcgt
gatattacagtggaaggacacgatgttcccaaacctatacagtctttccaggaggcaaat
attccaagtttccttctcgacgtgatacacagattgggttttgctgagccaacacctatt
cagtctcaaggatggccaatggctttaaagggtagagatttcattggtatcgcagagact
ggttcagggaaaactctggcatatatggttcctggaattgttcatgttagcggacagcct
cgattgaaacaaggtgatggtcctgttgtgctggtcctagcacctaccagagagttggct
gttcaaattcaagaggaaacttcaaaatttataggaaagtcacatatcagaagtacatgc
atatatggtggtgcaccaaaaggacaacaaatcagagctcttcgaacaggagttgagatt
gtaatcgcaacaccagggcggctaattgatatgctggattctggccatacaaatttgagc
agagtaacataccttgtgctggatgaggctgaccgcatgttggacatgggatttgaacct
cagatcaggcaaatagtttctcagatgcgaactgatagacagacgctatactggagcgct
acatggcctaaagaggtggagaagttagcaaaacagttcttgcataatccctacaaggtg
attattggatcgccggatttgaaagccaatatgtcgataacacaagttgttgatgttgtc
acagatatggagaagtacagtaggttgatgaagcttttacaggagcagatggatggaagc
cggattttgatattcttagaaaccaaaaaaggatgtgaccaggtcaccagaaagttgagg
atggatggatggccagctttatctatccatggtgataaaagccaagaagaaagggacttt
gtattggctgagttcaaaagtggcaggagtcttataatgactgctactgatgtagctgca
cgtggtcttgatgtgaaagacataaaatgtgtgatcaattatgattttccgaaatgcctc
gaggattatattcacagaattggtcgaacagggcgtgctggtgccaagggtaaagctttc
acctttcttacagataaaaatgctaagattgccaaggagctcactaagattctacgagaa
gccgggcaagtggtgagtccctcattagctgccttggcacgatcaagttacaccagttac
tctggtggaggttcagcgcgtagcttccgacaaatgggtagaggtggtcactcgtttggc
agtcgatcgggttcaaatactatccctttagggacaaagaggaagtggtaa
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