Papaver somniferum (opium poppy): 113345039
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Entry
113345039 CDS
T05758
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial-like isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113345039
Enzymes [BR:
psom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
113345039
Transfer RNA biogenesis [BR:
psom03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
113345039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
113345039
NCBI-ProteinID:
XP_026444686
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MSMAVRAINTCSTSRSSSSSTLRCRLYHFSPHNHYHHQNPNKNLGFRFRFPVFRSRELLI
SHGVYKSCSVHTLMDSVLEELEEIRARKRIRAATKVGIASGELLLDKIGKQRPLQKGLLL
EFRKDSERLLLAVAQKPDGKKNWMVTDQNGVTSSIKPQQVTYIIPGVENFNYEEISRFIQ
KADSNLDPTLLEYAWMELLEKQKSVTAEEMAEIIYGSEEPLDSYSAHVLLSKDEIYFSVV
EVKGYRSVYGPRSGEQVEELLRRKEVKEAAEKELQEFAQLLKSAKAMPSSSKPHKESWTL
EEKNRQKIEALEACAIDACKNDDQKKIAGTILKAMGLPKLSSSALKLLISIGYFPVHIDL
DLLKLNVRTKYSDDIISSAEDLLSNSADPDETDRIDLTHLKVYAIDVDEADELDDALSAR
RLQDGRIQVWIHVADATRFIQPGSKVDREALRRATSIFLPTATIPMFPEKLAMEGMSLKQ
GERCSAVTVSVILRHDGSIAEFNIENSVIKPTYMLTYESATELLHLNLEEESELKLLSEV
ASLRLQWRREQGAIDTCSIEPRIKVVNPDDPEPIINLYVENQADPAMRLVSEIMIMCGEA
VATFGSLNNIPLPYRGQPQSNIDTSAFDHLPEGPVRSVALIKCMRAAEMEFRKPARHGIL
GVPGYVQFTSPIRRYMDLLAHYQIKAFLREDPLPFSAGQLEGMASLINMHIKVARRLQNS
SLRYWLVEYMRRQPKQKKFRALILKFIKDRIAGLLLVEVGMQASAVVSIGKQIGDEIEVR
VEEAHPRDDVFSVIEVPQMS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggctgttcgagcaataaatacttgttcaacatctcgttcttcttcatcttca
acacttcgatgtcgtttatatcatttctctccacacaaccattaccaccaccaaaaccct
aataagaatttagggtttcgttttcgatttcctgtattccgttctagggagttactaatt
agtcatggagtttataagagttgttctgttcatactcttatggatagtgttctggaagaa
cttgaagaaattcgagctaggaaacgaattcgtgctgcaaccaaggtggggattgctagt
ggggagttacttttagataagattggaaagcagcggccgttgcagaaagggttattacta
gagtttcggaaagattctgaaaggttgttactagcagttgctcagaaaccagatggaaag
aagaattggatggtgacagaccagaatggggttacgtcttctattaagccgcagcaagtt
acatatatcatccctggggttgaaaatttcaactacgaggagatatcaagattcattcaa
aaagctgacagtaatttggatccgacattgcttgagtatgcttggatggagcttcttgag
aagcaaaagtctgtcacagctgaagaaatggcagagattatttatggtagtgaggagcct
ctggacagctattcagcacatgttttgctatcgaaagatgaaatttacttcagcgtggtg
gaggtcaagggatatcgttctgtttatggtccacgttctggtgaacaggtcgaagaactt
ctacgcaggaaggaagtgaaggaggctgcagaaaaggaacttcaggagtttgcacagcta
cttaaatctgctaaggctatgcccagctcttctaaaccacacaaagagtcatggacatta
gaagagaaaaaccgccagaagattgaggctctcgaggcttgtgctattgatgcgtgcaaa
aatgatgatcagaagaagatagctgggacgattctcaaagcaatggggttgcctaagctg
tcatcatctgcattaaagcttctcatttctattgggtatttccctgttcacatcgatcta
gatctcttgaaactcaacgtccgtacaaagtactccgatgatataatttcttctgctgaa
gaccttttatccaactctgctgatcctgatgagaccgacagaatagatctgacccacttg
aaggtttatgctattgatgttgatgaagctgacgagcttgatgatgccttaagtgcaaga
aggcttcaggatggtcgcattcaagtttggatacatgttgctgatgcaactagattcatt
cagccagggagcaaggttgacagagaggcattgagaagagccacgtccattttcttgccc
actgccactattcctatgtttcctgagaaacttgcaatggaaggtatgagcttgaagcag
ggagagcgttgcagtgcagtcacagtatctgtaatactgcgccatgacggcagtattgca
gagttcaacatagagaatagtgttatcaaacctacctatatgttgacgtatgagagtgca
actgagttgcttcacttaaaccttgaagaggagtctgaacttaagctgttgtctgaggtt
gcatctcttcgactgcaatggcgtcgcgagcagggtgcaatagacacctgctcaatagaa
ccacggatcaaggtggttaatccagatgacccggaacctataatcaatctctatgtcgaa
aatcaagccgaccctgctatgcgactggtctctgaaatcatgataatgtgtggggaggct
gtagctacttttggttctttgaataacattcctttgccctacagagggcaacctcaatca
aacatcgatacatcagcatttgatcatcttccggaaggacctgttagaagtgttgcttta
atcaaatgcatgcgtgcagcagaaatggaattcaggaagcctgcacgtcatggaatcttg
ggcgttcctggttatgtgcagtttacatctcccatacgcagatatatggatcttcttgct
cattaccagattaaagccttccttagagaagatcctcttcctttttctgctggtcagttg
gaagggatggcatcactgattaacatgcatataaaagtagcaagaagactccagaacagc
agtctaaggtattggttggtagaatatatgagaaggcagcccaagcaaaagaagttccgt
gctttaattcttaagtttattaaagaccggattgcaggtttacttttggttgaggttggg
atgcaagcttctgcagttgtgtcaattgggaaacaaataggagatgaaatagaagttagg
gtagaagaagcccatccacgtgacgatgtcttctccgttattgaagtacctcaaatgtct
tag
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