Papaver somniferum (opium poppy): 113345130
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Entry
113345130 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113345130
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113345130
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
Helicases
113345130
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
Cas3-like_C_2
P-loop_SecA
ParD_antitoxin
Motif
Other DBs
NCBI-GeneID:
113345130
NCBI-ProteinID:
XP_026444749
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MENPTSFLFSGLHFNRKKFADDFARFSGKSNETVVEKEEEVEPEPEPKPETVAVSGGKKR
KRKGKTEVNVEGFSVFKTSDSVVDVDEKKKKKKIQDVITEEKKEINRQIERDALFRKKHG
IHISGHNVPSPLQSFKELSSRYNCEPYLLNNLTELGFKEPTPIQRQAIPVLLSGRECFAC
AATGSGKTLAFLLPMLVKLEPGSVDGVQAVIICPTRELAAQTTRECRKLAKGKGFYVKLM
TRELVTNGDFKKMHCDILVSTPRRLQFAIRKRKLNLSRVAYLVLDESDKLFELGFVKQID
LVVKECSNPSIIRSLFSATLPDSVEDLARSIMHDAVRVIVGRKNSASELIKQKLVFTGSE
EGKLLAVRQSFAESLNPPVLVFVQSKERAKELYRELAFDNIRVDCIHADLTQTERDDAVD
NFRAGKTWVLIATDVISRGMDFKGVNCVINYDFPETASGYIHRIGRTGRAGRAGEAITLF
TEADIPFLRNIANVMAASGCEVPPWIMNLDKLRRRKHRPRRDSISTKPKDEEKEEKERER
EELLKRKKKPRSSKKSIRTKSKGKDKGEKEEEGSPKRIKKPRPSKKSITAKPKDEGLAEA
SDKPKKKKKQLPSSDSITTKSKVTKEKASPKLRSKKRSLTEDSPQQSRKSKKVK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcctacatcgtttttgttctctggtcttcatttcaatcgaaagaaatttgct
gatgattttgctagattcagtggtaaatctaatgagacggtggtcgaaaaggaagaagaa
gtagaaccagaaccagaacccaaaccagaaacagtggctgtttctggtggaaagaaaagg
aaacgaaagggaaagactgaagtaaatgttgaaggttttagtgtattcaaaacatctgat
tctgttgttgatgttgatgagaaaaagaagaagaagaagatacaagatgttatcactgaa
gagaaaaaggaaatcaatagacaaattgagcgtgatgcattgtttcgtaagaagcatggg
attcatatttctgggcataatgttccgtcgccacttcagagtttcaaagagttgagctcg
aggtataactgtgaaccatatttgttaaacaatttaacagaacttgggtttaaagagcca
acaccaatccaaaggcaggctattccagtcctcctatctggtcgagagtgctttgcttgt
gctgctacaggatctggcaagaccttggctttcctattgcctatgcttgtgaaacttgag
cctggatcagtggatggagtgcaagctgtaattatttgcccaacgcgagaattagctgct
cagacaaccagagagtgcaggaagttggctaaaggaaagggattttatgtgaagttgatg
accagagaacttgtgacaaatggtgactttaaaaaaatgcactgtgacattcttgtgtct
acacctcgtcgcttacagtttgctatccggaaaagaaagcttaatctaagcagagtagcg
taccttgtcctggatgagtctgacaagctattcgagcttggatttgttaagcaaattgat
ttggtggtcaaagaatgctcaaatccttccataatacgatcattattcagtgccacttta
cctgattctgtggaagatctagcccgatcgatcatgcacgacgcagttcgagttattgtt
ggaaggaagaattctgcatcagaattgattaaacagaaactggttttcactggatctgaa
gaagggaagttgctcgctgttcggcaaagtttcgcggagagtttgaacccacctgtacta
gtgtttgtccaaagcaaggaacgggcgaaggagctctatagggagctagcatttgataat
attagggtcgattgtatacatgcagatctgacccaaacagagcgagacgatgcagtagat
aacttcagagccggaaaaacatgggttttaattgctactgatgttatttctcgtggtatg
gacttcaagggcgtcaattgtgtcattaattatgattttcctgaaactgcttcaggatat
atacaccggataggtcggactggcagagctggacgggctggagaagctattactttattc
acagaggctgatataccatttttgcgaaatatagcaaatgtgatggcagcctcaggttgt
gaggttcccccgtggattatgaacttagacaagctgaggaggaggaaacatcgtccaaga
agagattctatttcaaccaagccgaaagacgaagaaaaagaagagaaagaaagagagaga
gaggaattgctgaaacgcaagaagaaacctcgttcgagtaagaagtctattagaaccaag
tcaaaaggcaaagacaaaggagagaaagaagaagaaggctcgcctaagcgcattaagaaa
cctcgtccaagtaagaagtctattacagccaagccaaaagacgaaggactagcagaagct
tctgacaaaccgaaaaagaagaagaaacagcttccaagtagtgattccattacaactaag
tcaaaagtcaccaaagaaaaagcctccccaaagctcaggagcaagaaacgcagtctgact
gaagactctcctcaacaaagccgaaaatccaagaaggtgaaataa
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