Papaver somniferum (opium poppy): 113345422
Help
Entry
113345422 CDS
T05758
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
psom04141
Protein processing in endoplasmic reticulum
psom04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113345422
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113345422
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113345422
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113345422
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113345422
03009 Ribosome biogenesis [BR:
psom03009
]
113345422
03110 Chaperones and folding catalysts [BR:
psom03110
]
113345422
04131 Membrane trafficking [BR:
psom04131
]
113345422
03051 Proteasome [BR:
psom03051
]
113345422
03029 Mitochondrial biogenesis [BR:
psom03029
]
113345422
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113345422
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
113345422
Spliceosome [BR:
psom03041
]
Complex B
Other components
Prp19 complex
113345422
Complex C
Prp19-CDC5 complex
113345422
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113345422
Chaperones and folding catalysts [BR:
psom03110
]
Heat shock proteins
HSP70 / DNAK
113345422
Membrane trafficking [BR:
psom04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
113345422
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
113345422
Proteasome [BR:
psom03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
113345422
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
113345422
Exosome [BR:
psom04147
]
Exosomal proteins
Proteins found in most exosomes
113345422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
113345422
NCBI-ProteinID:
XP_026444981
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRVSDPSVQADMKLWPFKVIAGPGEKPMIVVTYKGEEKQFSA
EEISSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFY
TSITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSSVHDIVLVGGSTRIPKVQQLLQEFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNQKVQDLLLLDVTPLSLGLETAGGVMTTLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAERYKAEDEQHKQ
KVESKNALENYAYNMRNTIKDEKIAGKLEPSDKKKIEDAIEGAIQWLDTNQLAEAEEFDD
KMKELESICNPIIAKMYQGGVGPDMGGAGGMDEDGPSVGAGSGAGPKIEEVD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaaggggaaggaccagccattggtattgatctgggaacaacatattcctgt
gtaggtgtgtggcaacatgatagggttgagattatcgctaatgatcaaggaaacagaaca
acaccttcttatgttgctttcactgatactgaacgtttgattggtgatgctgctaagaat
caagttgctatgaaccctgttaacaccgtctttgatgcaaagcgtttgattggaagaagg
gtgtctgatccatcagttcaagctgatatgaagctatggcctttcaaggttattgctgga
ccaggtgaaaaacccatgattgttgtgacttacaaaggcgaagagaagcaattttcagct
gaagagatatcatctatggttcttattaagatgcgtgagattgcggaagcctaccttggt
tcttctataaagaatgctgttgtgactgtccctgcatacttcaatgattcgcaacgtcaa
gccacaaaggatgctggttctattgctggtctaaatgtcttgagaatcatcaatgagcca
actgctgctgcaattgcgtatggtcttgataagaaggcgtcgagtgttggggaaaagaat
gttcttatttttgatcttggtggtggtacatttgatgtttctttactgactattgaagaa
ggtattttcgaagtgaaggctactgctggagatacccatcttggaggagaagattttgat
aacaggatggtgaatcattttgtgcaagagtttaagaggaagaacaagaaggatatcagt
ggaaaccctagggctttaagaaggttgaggacagcttgtgagagggccaagaggactctt
tcctccactgcccagaccacaattgaaattgattcgttgtatgaaggtgttgatttttac
acatctattactcgtgcgagatttgaagagatgaacatggatttgttcaggaaatgtatg
gagcctgttgagaagtgtttgagggatgctaagatggacaagagcagtgtccatgatatt
gttctagtgggtggatcaactagaattcctaaagtgcagcaattgttgcaggagttcttt
aatgggaaagaactttgcaagagtatcaaccccgatgaagctgtggcgtatggagcggct
gtgcaggcggcgatcttgagtggtgaaggtaatcagaaagtgcaggacttgttgctgttg
gatgttactcctctctcccttggactcgagacagctggaggtgtcatgactacattgatt
ccaagaaacaccaccatccccaccaagaaggagcaagttttctctacctattcagacaac
cagcctggagtgctaattcaggtgtatgaaggagagagagcaagaacaaaggataataac
ttgcttgggaaattcgagctgtctggaatcccacctgctcctcgtggagtccctcagatc
actgtttgctttgacattgatgcaaatggtattctgaatgtatctgctgaggataaaacg
acagggcaaaagaacaagatcacaatcactaatgacaaaggaaggctgtccaaggaggag
attgagaagatggtgcaggaggccgagaggtacaaggcagaggatgaacagcacaaacaa
aaagttgagtcgaagaatgctttggagaactatgcttacaatatgaggaacactatcaag
gacgagaagattgctgggaagttggaaccatctgacaagaagaaaatcgaggatgcaatt
gaaggtgccatccagtggcttgacaccaaccagcttgcagaggcagaggagttcgatgac
aagatgaaagagctggaaagtatctgcaacccaattatcgccaagatgtatcaaggtggt
gttggacctgacatgggtggagctggtggcatggatgaagatggtccttcagtgggtgct
ggtagcggtgcaggacccaagatcgaggaagtcgattaa
DBGET
integrated database retrieval system
