Papaver somniferum (opium poppy): 113346482
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Entry
113346482 CDS
T05758
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113346482
04121 Ubiquitin system [BR:
psom04121
]
113346482
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113346482
Membrane trafficking [BR:
psom04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113346482
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113346482
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
Prok-RING_1
zf-ANAPC11
zf-C3HC4_3
zf-Nse
zf-RING_16
zf-RING_5
DUF7685
zf-HC5HC2H
Anti-TRAP
Motif
Other DBs
NCBI-GeneID:
113346482
NCBI-ProteinID:
XP_026445822
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MSVSPSNVRSVNYIHRTYRLYWCYQCHRSVRVATSNNPSEIICPRCFGEFLHELDVVRPR
PRSRLVLDLSGIDASPEARLLEALSLMLLNPQQPPPQQHPFHRRRRSSSEFDFRRNRWEF
ENDNGSRAPWSYDILFPSSNQNPHSRRSRRRTTNEDEDEDTSLPTFNPSDPRAVDPRNYF
AGPGLNELIEELTQNDRPGPSPAPASAIDALPTVKVTQDYLTNNESTCPVCKDEFEVGVD
VREMPCKHVYHSDCIVPWLRLHNSCPVCRNELPAANDQQQPHEEGDSDSQDTSSSVGGME
EHGARNRRGGWRWNNLSSLWPFRSRQRDFTSHDDNASTATRGAANSWWRSWFLL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtcgccttcaaatgttaggtcagttaactacatccacagaacgtaccgtcta
tactggtgttaccagtgtcatcgatccgtcagagttgccacatcaaacaacccatctgaa
atcatttgtccccggtgttttggcgaattcttacatgaacttgatgtagttaggcctagg
ccaaggtctagacttgtacttgatctctctggaatcgatgcatctccagaagctcgtctg
ctagaagctctttctcttatgctgcttaatccacaacaaccgccaccgcaacaacatcca
tttcaccgtcgaaggcgcagcagctctgaatttgatttcaggagaaaccggtgggagttt
gaaaatgataatggtagtcgagctccttggtcttatgacattctatttccttcttctaac
cagaatccacattctcgtcgttctcgtcgtagaaccaccaatgaggacgaagatgaggat
acgagtctgcctacttttaacccgagtgatcccagagctgttgatccaaggaattacttt
gctggaccagggttgaacgaattgattgaggaactaacacaaaatgatagacctggtccg
tctccggctcctgcatcagcaattgatgcgctgccgacggtgaaggtgacacaagactat
ctgacaaataacgaatcaacttgtccagtttgtaaggatgaatttgaagttggtgttgac
gtgagagaaatgccgtgtaaacatgtctatcattctgactgcattgttccttggctgagg
cttcacaattcttgccctgtttgtcgcaatgagcttccagctgccaatgaccagcaacag
cctcatgaggaaggtgatagcgatagtcaagacacttcgtccagtgtaggaggaatggaa
gaacatggtgctaggaatcgtcgtggtgggtggcggtggaataatttatcctctttatgg
cctttccgatcgaggcaacgcgattttacttcgcatgatgacaatgcttctactgcgact
cgtggagcagcaaattcttggtggcgttcttggtttcttctgtag
DBGET
integrated database retrieval system
