Papaver somniferum (opium poppy): 113346643
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Entry
113346643 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 25-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113346643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113346643
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113346643
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
113346643
NCBI-ProteinID:
XP_026445905
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Position
2:complement(1226675..1234644)
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AA seq
932 aa
AA seq
DB search
MEEVENDEVSLVSISSDSSDSSDDYIGDVEDDDEEEDGGQSPVDSPPSDETRKSQNVDAL
VRGNLVVKRQPLIPKVLSVSDGAAIARKPFKPPCSSGYSDQKEQLVRRLWARKRFVPWGS
SRPVVIGISNRTDNPSAEKDTPEPSVTLPEGIEPLVLWQSEESGEECVISISIMVDPVLV
GFLRPHQREGVQFMFDCVSGVCAPGVFGCILADDMGLGKTLQSIALLYTLLRQGFDGEPM
AKKAIIVTPTSLVSNWESEIKKWVGDRLQLIALCESTRDDVVSGIDSFIRPRSPYQVLIV
SYETFRMHSSKFDKSGSCDLLICDEAHRLKNDQTLTNRALAGLSCNRRVLLSGTPMQNDL
EEFFAMVNFTNPGILGDAAYFRRYYESPIISGREPTATEEERNLSVERSAELSTKVNQFI
LRRTNALLSNHLPPKIVEVVCCKLSPLQSELYNHFIHSKNVKRAISEEAKQSKILAYITA
LKKLCNHPKLIYDTIKSGSGTSGFEDCLRFFPPAMFSGRSGAWTGGDGIWVELSGKMHVL
ARLLAQLRSKTDDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGTTSISKRQKLVNCFND
PSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF
LSTGTIEEKVYQRQMSKEGLQKVIQKEKGDNLKSQGNALSTEDLRDLFSFYEKSRSEIHE
NMNCSRCETCELEDNAPEIARQVEDGAASQDDQGDIGGFQEISGCLDKLKSSEKQLGTPL
EEDLGSWGHHFLSATVPDSILQASAGDEVTFVFTNQVDGKLVPIESMRSTPRGAEGNKIH
AVTRVIQNQKSTSFLRQHAQPSPAISSTVNSNSSCKTTPGLSRPSLKGPTKFTKMSTQST
TPIPTKPRTSFGKQLPLKRLSSHSDDHDDDFM
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtcgaaaatgatgaagtttctttggtgtctatctctagcgattctagtgat
tctagtgacgattacatcggagatgtcgaagatgatgatgaagaagaagacggtggacaa
tctcctgttgattctcctccttctgatgaaactcggaaatcccaaaatgttgatgccctc
gtaagaggtaaccttgttgttaaaaggcaaccattgattcctaaagttctttcagtatca
gatggtgcagcaatagctagaaaaccgttcaagcctccttgttcgagtgggtacagtgat
cagaaagaacagcttgttcgtcgtttatgggctcgtaaaagatttgtaccatggggttca
tcaagaccagtggtaattggaataagcaaccgtacggataacccaagtgctgagaaagac
actccggagccaagtgtgactctgcctgaaggaatagagcctttggtgttatggcaatct
gaagaatccggagaggagtgtgtgatttctatctcgataatggtagatccagtgcttgtt
ggtttcctccgtcctcatcagcgtgaaggtgttcaattcatgtttgattgtgtatctggg
gtatgtgctcctggtgtttttggatgcattctagctgatgatatgggtttggggaaaact
ttacagtcaatcgcattactgtatactcttcttcggcagggatttgatggagagcccatg
gctaaaaaggcaataattgtcactcctaccagccttgtaagtaattgggaatctgaaatt
aaaaaatgggtcggagatagactacaacttattgctctttgtgagagcaccagggatgat
gttgtttctggaatagacagtttcattagaccgcgcagtccatatcaggtgctaattgtt
tcctatgagacattccgaatgcattcgtcaaaatttgataaaagtggatcctgtgacctc
cttatttgcgatgaggcacaccgactgaagaatgaccagacactaacaaatcgggcatta
gctggtctttcatgcaaccgacgcgtattattgtcagggactccgatgcagaatgatctg
gaagagttctttgcaatggttaattttaccaatccaggaatcttgggggatgctgcatat
tttcgacgatactatgagtcaccgatcatttctggaagagaacctacagcaacagaagaa
gagagaaatcttagtgttgagcgatctgctgaattaagcacaaaagtaaatcagtttatt
ttgaggaggaccaatgctttgctatcaaatcatctaccgccaaagatagttgaagttgtc
tgttgcaaattgagtcctcttcagtcggagttatataaccattttatacattccaaaaat
gttaagcgagcaatatctgaagaggcgaaacaatcaaaaattttggcatatatcactgct
ttgaaaaagctttgcaatcatcctaagcttatctatgatacaatcaaaagtgggtcagga
acgtcgggatttgaggattgccttcgcttttttcctcctgcaatgttttctggaagatct
ggagcatggactggtggtgatgggatttgggttgaactttctgggaaaatgcatgtttta
gctcggttgctggcccaattgcgtagcaaaactgatgaccgtattgtccttgtttccaac
tatactcagactctggacctctttgcacaattgtgtcgggaaagaagatatccacacttg
aggcttgatggaaccacctctatcagtaaaagacagaaattggtaaactgttttaatgat
ccttcaaaggatgaatttgtctttctcttaagtagcaaggctggtggttgtgggcttaat
ttgattggtggaaatcgccttgtcttatttgatccagattggaatcctgcaaatgacaag
caagctgctgcaagagtctggagggacgggcaaaaaaagagagtttacatctatcggttt
ttgagtactggaaccattgaagaaaaggtctatcagcgtcaaatgtcaaaagaagggctt
caaaaagtcattcagaaagagaaaggggataatctgaagtcacagggaaatgctctttcg
actgaagacctacgggatcttttcagcttttatgaaaagtccaggtctgaaattcatgaa
aatatgaactgcagtcgttgcgaaacttgtgagttagaagataatgctcctgaaatcgca
agacaggttgaagatggagcagcaagtcaggatgaccaaggtgatataggtggatttcaa
gagatatctggttgcttggataagttaaaaagctcagagaaacagttgggaactccacta
gaagaagacctcggaagttgggggcatcattttctctcggcaacggtacctgattcaatt
cttcaagcttctgcaggtgacgaggtcacatttgttttcacaaaccaagtagacggaaag
cttgtaccaatcgagtcaatgcgttcaacccccagaggagcagaaggaaacaaaatccat
gctgttacaagggtgatccaaaaccagaaatcgacgtcattcttgcggcaacatgcacaa
ccaagtccagcaatctcatccactgtaaattctaattcaagctgtaagacaacaccaggt
ttgtccagaccttcattaaagggacctacgaaattcacaaaaatgtccacacaaagtact
acacctataccaacaaaacctagaactagttttgggaaacagttaccccttaagagatta
tcgtcgcattccgatgatcatgatgatgattttatgtaa
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