Papaver somniferum (opium poppy): 113346670
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Entry
113346670 CDS
T05758
Name
(RefSeq) transcription factor SPATULA-like
KO
K28361
transcription factor SPT/ALC
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
113346670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113346670
Transcription factors [BR:
psom03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
113346670
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
113346670
NCBI-ProteinID:
XP_026445939
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Position
2:complement(2678794..2682572)
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AA seq
457 aa
AA seq
DB search
MYEPCSSSSSSSSTTTTTSLACPVLESDEISLFVQHLFHSSSSSTITCTSSSSSSIKQMP
LSAQFAKSFQEDQQNRSCLTNHLPDHTHHNRNIHSDFRLRNDSSNLFLSSSAAAGSLYFP
SASSSEIIKDSTTTTTTVISDTGGVNRDFDQKDSDAVNVSVKRRKFPVDNIDLDDYDGES
EEGLEGSEGPSKTVPSRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKA
SMLDEAIEYLKQLQLQVQMLSMRNGLSLHPLYLPGVLQPPQMTQMRNMSFGEGNALPQHM
NIGTGTHPASQEAQNSFALSNQSTALHQPMVLPNMTNIALPTTSFGLDSSLIQLHHGQFQ
LSTASEEIYREDVPLPQQLHKSISTRNASASVPFDSRSSIVENTDTVESSVARGNRPQAM
LPKDVTDDQNFIQHMHNIHTRSLMDDDGKIKTKTVDF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaccctgttcctcctcctcttcttcttcttctactaccactactacttcttta
gcttgtccagtacttgaatccgacgaaatatctctttttgttcaacatctttttcactct
tcttcttcttctacaataacttgtacttcttcttcttcctcttctatcaaacaaatgcct
ctttcagcacaatttgctaaatcatttcaagaagatcaacaaaatcgttcatgtctaacg
aatcatttacctgatcatactcatcataatcgtaatattcactcagattttcgactcaga
aacgattcatctaatttgtttctttcttcttctgctgctgctggtagtctttattttcct
tctgcttcttcttctgagattattaaagattcaacaactactactacaactgtaatttct
gatactggtggtgttaatagagattttgatcagaaagattctgatgctgtaaatgtttct
gttaaaagaagaaaatttcctgttgataatattgatctcgatgattatgatggtgaaagc
gaggaaggacttgaaggatcggaagggccatcaaaaacagttccatctcgaagttcttca
aagagaagtagagcagctgaagttcataatttgtctgaaaaaaggaggagaagtagaatc
aatgaaaagatgaaagctttgcagaatctaattcctaattctaacaagaccgataaagct
tcaatgctcgatgaagcaatcgagtatcttaaacaactccagcttcaagttcaaatgtta
tcaatgagaaacgggttgagtttgcatcccttgtacctgcctggagttttacagcctcca
cagatgactcagatgcgtaatatgagctttggcgaaggaaatgcacttccacagcatatg
aacattggaacaggtacacatcctgcgagccaagaagcacaaaattcctttgctttatca
aaccaaagcacagctttgcatcaacctatggtccttccaaatatgacaaatatagccctt
ccaacaacatcatttggcttggactcatcattaattcagctccaccatggacagttccag
ttatccacagcttctgaggaaatatatagggaagatgttccacttccacagcaattgcac
aaaagtatctctaccaggaatgcctcagcttctgtaccctttgattcgcgatcatcaata
gtagagaacacagacactgtggaatcttctgtggcgcgaggaaatagaccacaagccatg
ctcccgaaagacgtaacagatgaccaaaatttcattcagcatatgcacaacatacataca
agaagtttgatggacgatgatggcaagataaagacaaagacggtggatttttag
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