Papaver somniferum (opium poppy): 113346755
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Entry
113346755 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113346755
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113346755
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113346755
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113346755
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113346755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
113346755
NCBI-ProteinID:
XP_026446048
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Position
2:6110149..6113010
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AA seq
232 aa
AA seq
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MADSPRRRYSRSPPPLERPRSRSRSRDRSRSRSRSPNGNDALNPGNTLYVTGLSSRVTER
DLEDHFSKEGKVSSCRLVMEPRTQISRGFAFVTMDNVGDADHCIKHLNQSVLEGRCITVE
KSRRKRPRTPTPGNYLGAKSTRETGYRGDRGRYRGGGGGYGRDEYRRSPRRSPPYRGGRD
YSPPRRSPYGGRHYSPPPRRSPYGGGRSRRERSRSYDGPERGYGRRPDVYSR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcacctcgtagaaggtattcaagatctcctccccctctagaacgtcccaga
tccaggtccagatcaagggaccgatctagatccaggtccagaagtcctaacgggaatgat
gccttaaatcctggaaatacgctttacgtgactggcctgtcaagcagggtcacagaaaga
gaccttgaggatcacttctctaaggagggaaaggtaagttcatgccgtctcgttatggag
cctcgtacacagatttctcgaggttttgcttttgtgacaatggacaacgttggagatgct
gaccattgtataaaacatctcaatcaatctgtattagagggcagatgcatcactgttgag
aagtcaaggaggaagcgccctagaacacctactcctggcaactatctaggagctaaaagt
accagagaaactggctatagaggcgaccgtggcaggtaccgtggtggtggcggtggttat
ggccgtgatgagtatcgtaggtctccgaggcgctcaccaccttatcgaggaggccgtgac
tattctccccctcgaagatctccgtatggtggtcgtcattattccccccctccacgaagg
tcaccttatggcgggggacggtctaggagagaaagatctaggtcgtatgatggtcccgaa
aggggttatggacgtcgccctgatgtctactctcggtaa
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integrated database retrieval system
