Papaver somniferum (opium poppy): 113346765
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Entry
113346765 CDS
T05758
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00900
Terpenoid backbone biosynthesis
psom01100
Metabolic pathways
psom01110
Biosynthesis of secondary metabolites
Module
psom_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
113346765
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psom01006
]
113346765
Enzymes [BR:
psom01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
113346765
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
113346765
2.5.1.29 geranylgeranyl diphosphate synthase
113346765
Prenyltransferases [BR:
psom01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
113346765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
QIL1
LRR_4
Motif
Other DBs
NCBI-GeneID:
113346765
NCBI-ProteinID:
XP_026446058
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All DBs
Position
2:complement(6274851..6276335)
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AA seq
426 aa
AA seq
DB search
MKTSIHLDVLNHTALTMYKISSLNSSSSLRILRLGNNKIAKQRLPTKPSSAINNPQLQGF
NTSSKQKQLNAMISFTTVIPSSSSTSDLYLTRNRPIFRYHQRAFRCSASVSASPSSNQIQ
FDLKTYWKTLITEINQKLDEAIPVKYPDQIYESMRYSVLDKAAKRAPPIMFIASAELFGV
PRRAAFPTACALEMVHAASLIHDDLPYMDNDFTRRGRPTNHAIYGEDMAILAGDALFPLG
FQHIVTYTPTDIIPESRILRVISEFARAVGSTGMAAGQFLDLTNGNKNLEFVQEKKFGEM
AECSAACGGLLAGADDEEVARLRRYGRTVGVLYQMVDDVLKAKEMEGEGKKNREKMSYVS
VNGVDKGLEMIEELSTKAKKELDGFDKYGYEKVAPLYSFVDYAVHRGFVVVDNQDDVSDA
REAASL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatcgatacacctagatgtattgaatcatacagcactgacaatgtacaaaatc
tcatctcttaactcatcatcatcactacgaatattgcgtctgggtaacaataagatagcg
aaacagagattacccacaaaaccatcgtccgccattaataaccctcaacttcaaggtttt
aatacttcttctaaacaaaaacagttaaatgcaatgatttccttcacaactgtcattccc
tcttcttcttctacttccgatctctacttaaccagaaatcgcccgattttccgataccat
caacgagcattccgatgttcagcttcagtttcagcttcaccttcatccaatcaaatccaa
tttgatctaaagacatattggaaaaccttaattacagaaatcaatcagaaattagatgaa
gccattcccgttaagtatcctgatcagatctatgagtcaatgcgttattccgttcttgac
aaagctgctaaacgggctccccctattatgttcatcgcctccgctgaactcttcggagtt
cctcgccgcgctgctttccctactgcttgtgccctagaaatggttcatgcagcttcactg
atacacgatgatttaccatacatggataatgattttacaagaagaggcagaccaacaaat
catgcaatttatggtgaagacatggcaattctagctggagatgctctttttccgctaggg
tttcaacatatagtaacatatacaccaactgatatcattcctgaatctcgaatactacgt
gtgatctcagaatttgcacgggcagttggttcaacaggtatggcagcaggacaatttctt
gatttaacaaatggtaacaaaaatcttgaatttgtgcaagaaaagaagttcggagaaatg
gccgagtgttccgctgcttgtggtggattattagccggagctgatgacgaagaggtggcg
agattgagaaggtatggaagaactgttggagttttgtatcaaatggttgatgatgtttta
aaagcaaaagaaatggaaggagaagggaagaagaatagggagaaaatgagttacgtgagt
gttaatggtgtagataaaggattggaaatgattgaggaattgagtacaaaggctaagaaa
gaacttgatggatttgataagtatggttatgaaaaagttgcaccactttacagttttgtt
gattatgctgttcatagaggatttgttgttgttgataatcaagatgatgttagtgatgct
agagaggctgcttctctgtag
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