Papaver somniferum (opium poppy): 113346824
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Entry
113346824 CDS
T05758
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
psom03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113346824
03460 Fanconi anemia pathway
113346824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113346824
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113346824
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
113346824
FA (Fanconi anemia) pathway
Downstream FA components
113346824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Yippee-Mis18
HBB
Motif
Other DBs
NCBI-GeneID:
113346824
NCBI-ProteinID:
XP_026446136
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Position
2:complement(8529831..8541016)
Genome browser
AA seq
1310 aa
AA seq
DB search
MEESPATPKPNPNSRTIHHIGGLKVEFPYKPYGSQLAFMGRVISTLDRGKKQGHCHALLE
SPTGTGKSLSLLCSALAWQQNYKSKNLYSNLYHSRPEDPSEVYSDPLVSGGGFIHEPQPS
SNLESGSSARPPKKKKAAPTIYYATRTHSQISQVVREYRKTSYRVPMAILASRKNYCTNE
TVCGKEKVDEECKLLLKEDRTTGGGCFEFKNAHKVKCHPSLQKGGCNEAHDIEDLVKVGR
LVKGCSYFAARSMAEEAQLVFCPYNYIINSAIRRAMEVDLKDSIVILDEAHNIEDMARDA
GSVDVEEDVLCTLQTELGQLCFSDSMIYQPLYETIQGFISWMAHRKSTLVKHEFQHHFSC
WTGDNALRELREVGISQQHFPILQECATKAIKAASDAELGSAYLTGLSMITLEGLFSSLG
YFFAGGGLNALDYQLVLRRYVKRGAGQKSGEWTYTLSLWCLNPAVVFREIADLSMTVILT
SGTLSPMDSFSSELGVQFETCMEAPHVIDVGSQLWSAVVSTGPGNYPLNASYKTADAYTF
QDELGASLEEICKIVPGGALVFFPSYSLMDKLCKRWGETGQWSRLNAQKSLFVEPRGNQD
DFESVLKGYKNSISQGKKPGPSKIKRGKKRDLHHFYTQETSNGGAALLAVCRGKVSEGID
FSDDNARVVVIVGIPFPNTYDIQVAQKKKYNDTYSSSRNLLSGSRWYCHQAFRALNQAAG
RCIRHRFDYGAIIFMDERYKEERNTAYVSKWLRKSIKHYDNFGHSLEGLQSFFKDVKEWS
RQKYIDSTETSDINVEDKSSTKISVRSKLAIKKGYEEDIRSNTLSKGAGKQKITEKVVSK
NLVATEKGRHLPKSLTQVKNNDATHHKLNHQGNSMVETIKFARADETKTATCREYIDLEC
GSQKHSRFDGKSVASSTSSPESPAVKGNSGVADTDSNFMSSPADIIYREGHLSSTVVEAT
NDLWDQQSAHSRSLENSNGAISQGTFAMEITPERGINNDPVNLKSDTETSLSMSVNSHSQ
KRRKPVGSLFPNSQTDQFRTPDDKPNSSMRSIGASNLRIKLGFDADCTGCDCEKLNVPER
VVLNNSNASSLSSNTATDKILYICCSLCKSSLGLPENDYLVTCSLTSSSKVYLTSALRNG
LDSLSINEPESVPVVISDVSSVDRRLYNRLPSDDAPMQGTWSAKDGCVFSTIFCPFCTAP
KSLLGLHVMATDAPNMRLLNKIMFYFNSLEIKNLEVPKKNEPCLPAGGSNHGRSIDSELC
QVAPASGSGHVSDVALIDKFAYVKQEQDSGGWRTTRSKLKLPNRRFRSMT
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtctcctgcaactccaaaaccaaaccctaactcaaggactatacaccacata
ggtggtcttaaagttgagttcccatacaagccatatggttcacaattagcatttatgggt
agagtgatttcaaccctagatcgaggtaaaaaacaaggtcattgtcatgcactgcttgaa
tctccaaccggtacaggaaaatcattatcacttctttgttctgccctagcttggcaacag
aattataaatccaaaaatctttattccaatctttatcactctagaccagaagatccttca
gaggtttattctgatcctcttgtttctggtggtggatttatacatgaaccccagccttcc
agtaacttagagtcgggttcgtcggcaagaccgccaaaaaagaagaaggcagcacctact
atctattatgcaacgaggacacattcacagataagtcaagtagttcgtgaatatcgcaag
acatcataccgggtgccaatggctattctggcatcaaggaagaattattgcacgaacgaa
actgtgtgtgggaaagagaaagttgacgaggaatgtaagttgcttttgaaggaggatcga
actacaggaggaggatgcttcgaattcaaaaatgctcataaagtgaaatgtcatccatcc
cttcagaaaggtggctgcaacgaagctcatgatattgaagatctagtgaaagttggacgg
cttgttaaaggctgttcatactttgcagcacgttctatggcagaagaagctcaacttgtt
ttctgtccatacaactacatcatcaattcagccatccggagggccatggaagtagatctt
aaagactcaattgtgattctcgatgaagctcacaatatagaggacatggcacgcgatgct
ggtagtgtggatgttgaagaggatgttctttgtacattgcagacggagttggggcaactt
tgcttctcagattcaatgatttaccaacctttatatgaaacaattcagggattcataagt
tggatggcgcacaggaaaagcacgttagtgaagcatgagtttcagcaccacttctcatgt
tggacaggtgataacgctttaagagagcttcgagaagttggcatttctcagcagcacttc
ccaatcttgcaggagtgtgccacgaaggcaatcaaagctgcttctgatgctgagttaggg
tcagcttatttaactggcctttcaatgataacacttgaaggactcttttcttctctggga
tatttttttgctggaggaggactcaatgcacttgattatcagcttgttttaagaagatat
gttaagagaggggctggacaaaaatctggtgaatggacatataccttgagcctgtggtgc
ttgaatcccgctgttgtcttcagagaaattgctgatctttccatgaccgttattcttaca
tctggaacgctttcacccatggattcattttcatctgaactcggggttcagtttgagact
tgcatggaagctccacatgtgatagatgtgggatcacagctgtggtctgctgtagtttcc
actggcccagggaattatccattgaatgcaagctacaaaacagctgatgcatatactttt
caggatgaacttggtgcttctttggaggaaatttgcaagattgtaccaggtggtgctctt
gttttctttcctagctatagtttgatggacaagctttgtaaacgctggggtgaaacaggt
caatggtctcggttaaacgctcaaaaatcccttttcgttgagcctagaggaaaccaggat
gactttgagtctgttttgaaaggttataagaattcaattagtcaaggtaaaaaaccaggt
ccttctaaaatcaagagggggaaaaagcgtgacctacaccacttttacacacaagagact
tctaatggaggagctgcgcttctggctgtctgccgaggaaaggtctctgaagggattgac
ttttctgatgacaatgctcgagtggttgtgatcgttggcatcccatttccaaacacgtac
gatattcaggttgcacagaaaaagaagtataatgacacatacagttcatcacggaatctt
ctatctgggagtcgttggtactgccatcaagcatttcgtgctttgaatcaagctgcaggt
cgttgcatacgccataggtttgactatggagccataatcttcatggatgaacggtataag
gaagaaaggaatactgcatatgtttcaaagtggctcaggaaatccattaaacactatgac
aactttggccattcactggaggggttgcaatcatttttcaaagacgtgaaggaatggtcc
agacaaaagtatattgattcgacggaaacttctgacatcaatgtagaagacaaatcttct
acaaagataagcgtgcggagcaaattagcaataaaaaagggctacgaggaggatattcgt
tctaatactttgagcaaaggagcaggaaagcagaaaataactgagaaagtagtttccaaa
aacttagtagcaaccgaaaagggacgccacttgcccaaatctttaactcaggtaaaaaac
aatgatgccactcatcacaaactaaatcatcaggggaacagcatggtggagactataaag
tttgctcgtgccgatgaaactaagacggcaacatgcagagaatatattgacttggagtgt
ggttcccagaaacactcgaggtttgatggtaaatctgtggcatcttcaaccagtagtcct
gaatcacctgcagtcaagggaaactctggtgttgccgacacagacagcaattttatgtct
agtcctgcagatataatatatagggaaggccacctaagttctactgtagttgaggccacc
aatgacttatgggatcaacaatccgcccattcgagatcactggaaaattcaaatggagcc
atttcccagggtacatttgcaatggagattacacctgaaagagggattaataatgaccct
gtcaatctgaaatcagatacagaaacatctctgagtatgagcgtcaattctcattcacag
aaaaggagaaagccggtgggttcattatttcccaattcccagacggatcaattccgaact
cctgatgacaaacccaacagtagcatgagaagtattggtgcctctaaccttagaatcaag
cttggctttgatgcagactgcacaggatgtgactgcgagaagctcaatgttccggaaagg
gttgtgcttaacaactctaatgcatcatctttgtcatccaatactgctacagataagatc
ctatatatctgttgctccctctgtaaaagctcattaggtttacccgagaatgattacctt
gtcacatgttcattgacctcatcttccaaagtttacttgacatctgctttaagaaatgga
ttagacagtttatcgatcaatgaaccagaatctgtccctgttgtgatatctgatgtgtca
tctgttgatcgacgactttataatagacttcctagtgatgatgctccaatgcaaggtacc
tggtctgcaaaagatggatgcgtgtttagtactattttctgcccgttctgtaccgctccc
aagagtctcctcggtctacatgtcatggctactgatgcaccaaacatgcggttgctaaat
aagattatgttttatttcaacagcttggaaatcaagaatcttgaagtgccaaagaagaac
gagccctgcttgcctgctggtggttcaaatcatggtcggtctattgactcagagctttgc
caagttgctcctgcttctggcagtggacatgtttcagatgtagctctaattgataagttt
gcatatgttaaacaagagcaggattctggagggtggaggacaacaagatccaagctaaaa
ctaccaaacaggcgttttcgctctatgacgtaa
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