Papaver somniferum (opium poppy): 113347087
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Entry
113347087 CDS
T05758
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113347087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113347087
03036 Chromosome and associated proteins [BR:
psom03036
]
113347087
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113347087
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113347087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
113347087
NCBI-ProteinID:
XP_026446460
LinkDB
All DBs
Position
2:19895949..19902400
Genome browser
AA seq
1024 aa
AA seq
DB search
MFGSTSPAFGQSSTSPFGSQQQSVFGQNNNTASNPFAPKPFGSTNPFGSQTGGSIFGGNS
TGVFGGTQASSPLPSTPTFGNTASAPSFGGSVPSFGSPTPAFGSGSSLFGQKPAFGGFGS
TPPSQPSPFGGSTFQQTQSAFGGNAFSSSAPFGAQSQPAFGTNSSPAFGATNTPAFGAPT
TPAFGAATTPAFGSQPTAAFGAATTPAFGSQPTSTFGSGGGFGTPAFGSTSAPAFGSTST
PAFGSTSTPAFGSTSAASITPFGAQPFSFGTTPAFGQTNSGFGSTPFGSTPSVFGAQSSS
FGTQTTTPSTFGSPGSFGQPGFSGGQQQRGGSRVVAYAPTVEADQSGAQSSGKLESISAM
PVYKEKSHEELRWEDYQLGDKGGPNPAGQPSSIGGFGTTTTPQPNPFGSTPTNPFTSTTA
ANPFGQKTSSFPSTPSFGTSGFNTSTPSNPFATGSSPSTTSVFGQPSTPFFGTTSNSTPS
NTTSLFNQTPGSTNTFGTGLSIGTTPAFPRTNNLFGTSSSTFAPSTTSSFSQPTNAFTPP
NSGFGNNMFNSTPSQPSSSTSLFGQTNPSQQSQPAFSFPNFGQQQQQQPAGGGFGAATGF
GATSSIFNSASNVFGQNAFGQQPIGNQSNTVAPQPAAVATNPFGTLPTMPQISIGHTGSA
PSIQYGISNMPVVDKPAPVRVSSLLTSRHLSQRRIRLPARRSQAKSDSARVPFFSDDEEA
PSTPKADALFIPRENPRALVIRPLEHWTSRTSAEKSKDTNNIPLHENGKLSEKDSGSSLN
GSINQEKHKSNPSLGENGHDKERTQPAKSSQKANGVVHEDHSKNTQNGDSYITLNGHRAG
EAAIVYEHGADIEALMPKLCHSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGFGSI
KFAGETDVRNLDLESLVQFNNREVIVYLDESKKPPVGQGLNKAAVVTLLNIKCFDKKTGQ
QYTEGVKVEKYKEMLMKKARDQGAEFVSYDPIKGEWKFRVDHFSRYMLDDTDEEVGVEVA
LLAC
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttctacaagcccagcttttgggcagtcatcaactagcccatttggttcacag
caacagtcggttttcgggcaaaacaacaatactgctagcaatccttttgctcctaaacct
tttggtagtacaaatccgtttggttctcagacaggaggctctatctttggcggcaattcg
actggtgtgttcggaggaactcaggcttcttcgccgttgccttctactccgacatttgga
aacactgcatcagcccctagcttcggaggttcagtgccttcgttcggctctccgactcca
gcttttggcagcggatcttctctattcgggcagaagcctgcttttggcggctttggatct
actcctcctagtcagccaagtccatttgggggtagcacgttccaacaaacccaatcggca
tttggaggcaatgcatttagttcatccgctccttttggtgcacaaagtcaacctgcattt
ggtactaatagcagccctgctttcggagcgacaaacactcctgctttcggtgctcctact
actccggccttcggtgctgcaactacaccggccttcgggtctcaaccaactgcagccttc
ggtgctgcaactacaccagcctttgggtctcaaccaacttcaacatttggatcaggaggg
ggatttggcactccagcatttggttccacaagcgctccagcatttggttccacaagcact
ccagcatttggttccacgagcactccagcatttggttctacaagtgctgcttccatcact
ccttttggggctcaaccttttagttttggaacaacccctgcatttggccaaacaaattct
ggatttggtagtaccccttttggttcaactccgtctgtctttggagcccaaagttcttcc
ttcggtacccagactacaacaccctctacatttggatctccaggttcctttgggcagcca
ggttttagtggtggtcaacaacaacgtggtggaagcagagtagtggcttacgctcctaca
gttgaggctgatcaatctggtgcacagagttctggaaaacttgaatccatatcagctatg
cctgtttataaagagaaaagtcatgaagaactgaggtgggaagattaccagttgggtgat
aaaggtgggccgaatcctgctggtcagccatcatccattggaggctttggcacaacgact
actccacaaccgaatccttttgggtctacaccgacaaatccatttacatctacgacagct
gccaacccatttggtcagaaaacaagtagctttccttctactcctagtttcggcacttca
gggtttaatacatcaacaccatcaaacccttttgcaacaggttcatcaccctcaacaaca
agtgtatttgggcaacccagtactcctttttttggaactacttctaacagtactccttca
aatacaacctcgcttttcaatcaaacacccggatcaaccaacacatttggtacagggctg
agtattggtacaacacctgcattcccacggacaaataatctttttgggacttctagttca
acctttgcaccaagcaccacgtcttccttttctcagccaacgaatgcatttactccacca
aattctggcttcgggaacaatatgttcaattcaacaccgtctcagccttcttctagcact
tcattgtttggccaaacaaatccatcacaacagagtcagccagctttttcctttcccaac
tttggtcaacaacaacaacaacagccagcaggtggtggttttggtgcggcaactggtttt
ggagctacatcaagcatttttaacagtgcgtcaaatgttttcggccagaacgcctttggt
caacagcctattggcaaccaaagtaatacggtggcaccacaaccagctgctgttgcaacg
aatccttttggaacacttcctacaatgcctcaaatatcaattggacatacaggatctgca
ccatcaattcaatatggaatatctaacatgcctgtcgttgacaaacccgcacctgtccga
gtttcctccttgttgacttctagacatttgtctcagaggaggattaggttacctgccagg
agatcccaagctaagagcgacagtgcaagggtgccatttttcagtgatgatgaggaagct
cctagcacaccaaaagcagatgccctttttattccaagggagaatccaagagctcttgtt
atacgtcctcttgaacattggacctccagaacctctgcagaaaaatctaaggatactaac
aatattcctctgcacgagaacggtaaactctccgaaaaagattcaggttcaagtttgaat
ggctctatcaatcaggaaaaacataagagtaatccatcattgggggaaaatggccacgac
aaggagcggactcaacctgctaaatccagccaaaaggcaaatggggttgttcacgaggat
cattccaagaacacccaaaatggggactcatacatcacactgaatggtcacagagctggt
gaggcagccattgtatatgaacacggggcagatatcgaggcactgatgccgaaactctgc
cactctgactactacacagagcctcgaattcaagaactagctgccaaggagagggcagag
ccagggttctgccgcagggtgaaggacttcgtggtgggaaggcatgggtttggtagcatc
aagtttgcaggagagactgatgtacggaaccttgacctggaatccctcgtacagttcaac
aaccgggaggtgatagtttacctggatgagagtaagaagcccccagtagggcaaggactg
aacaaggccgcagtggtgacactcctcaacatcaagtgctttgataagaaaactggacaa
caatacacggagggggtgaaggttgaaaagtacaaggagatgctgatgaagaaggctcgt
gaccagggtgctgagtttgtttcttatgatcctatcaagggagagtggaagttcagggtg
gatcacttcagtcggtacatgcttgatgacactgatgaggaagttggtgttgaagtggcg
cttttagcatgttga
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integrated database retrieval system
