Papaver somniferum (opium poppy): 113347110
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Entry
113347110 CDS
T05758
Name
(RefSeq) pre-mRNA-splicing factor 18-like
KO
K12817
pre-mRNA-splicing factor 18
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113347110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113347110
Spliceosome [BR:
psom03041
]
Complex C
Other components
Step II factors
113347110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
WD40_2
MG280
SSXRD
Motif
Other DBs
NCBI-GeneID:
113347110
NCBI-ProteinID:
XP_026446483
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All DBs
Position
2:21154872..21158753
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AA seq
482 aa
AA seq
DB search
MRDVNIQENGAHIITPGASNSRQQSSSIPSSLVYFSSSFQGHNSFQGHKIIPFSQFVHTA
ATTTTTMDLLKQELMKKRQALSEDVGGRKVFKRSELEQKKIQKIREEEKKELEAKSKSLR
EKQLDTNNSSNTSSASSSHQNPKSESSKTPEALTEEKKIDDLVLPKQEVIRRLRFLKQPV
TLFGEDDGMRLDRLKETLKTGCFEIDNDMTEGQTNDFLRDISELRKRQKTGILSDRKRKT
REDGIEDADGNGGCREDEYSGDGGDSDVDVGKDLKRLKAKFEDLCDEDKILVFFKRLLIE
WKQELDDRPDAEKRTGKGKGIVATFKQCARYLNPLFSFCRKKVLPDDIRQSLLVVVNCCL
ERDYLAAMRQYISMAIGNAPWPIGVTMVGIHERSAREKIHTNSVAHIMNDETTRKYLQSV
KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEEKVVIGNQNQANEEMLRVMPAVSR
EN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagggatgtaaatatacaagagaacggtgcccatattataactccaggtgcaagcaac
agtagacagcagtcatcttcaatcccatcttctctagtttacttttcctcttcctttcaa
gggcacaattcctttcaagggcacaaaatcatcccgttttcccaattcgtacacaccgcc
gccaccaccaccaccaccatggatcttctcaaacaggaactgatgaagaagagacaagcc
ttatcagaagatgttggaggtcgtaaagtattcaaacgttcagaactcgaacaaaagaaa
attcaaaaaatcagagaagaagaaaaaaaagagttagaagcaaaatccaaatcccttcgt
gagaaacaactcgatactaacaattcatcaaatacatcttcagcatcaagttctcatcaa
aaccctaaatctgaatcatcaaaaacccctgaagctttaactgaagaaaagaaaatcgat
gacctagttttacctaaacaagaagtaatacgtcgtctacggtttcttaaacaacctgtt
accttattcggtgaagatgatggtatgaggctggatcggttgaaagagacgcttaaaact
ggttgttttgaaattgataatgatatgacagaagggcaaacgaatgatttcctcagagat
atttcggagttgaggaaacggcaaaagactgggattttgagtgataggaagaggaaaacc
agagaagatggaattgaagatgctgatgggaatggtggatgtagagaagacgaatatagt
ggtgatggtggtgattctgatgttgatgttggtaaagatttgaaaagattgaaagcgaaa
ttcgaagatttatgtgatgaagataagatacttgtgtttttcaagaggttattgattgaa
tggaaacaagaattagatgatagacccgatgcggagaagagaactgggaaaggtaaaggg
attgttgcgacgtttaaacagtgtgcaaggtatctgaatcctctattcagtttctgcagg
aaaaaggttcttcccgatgatatccgccaatctctactagtggttgtcaattgttgtcta
gagagggattacttagcagcaatgagacagtacatcagcatggccattggaaatgcgccc
tggcccattggtgttactatggttggtattcacgagcgttcagctcgagagaaaattcac
accaacagtgttgctcatatcatgaatgatgagacaactcgtaaatacctacaatctgtg
aagaggttgatgactttctgccaacgtcggtacccaacaatgccttcaaaggcagtagag
ttcaacagcttggcaaacggaagcgacttgcagtcacttttggcagaggagaaagttgtt
attggtaatcaaaatcaagcgaacgaggaaatgctgcgtgtaatgcccgcagtatcaagg
gagaattaa
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