Papaver somniferum (opium poppy): 113347233
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Entry
113347233 CDS
T05758
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113347233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113347233
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
GTPases
113347233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
GTP_EFTU_D2
EF-G_D2
SRPRB
EFG_IV
MMR_HSR1
Med19
Motif
Other DBs
NCBI-GeneID:
113347233
NCBI-ProteinID:
XP_026446631
LinkDB
All DBs
Position
2:29116968..29121073
Genome browser
AA seq
1030 aa
AA seq
DB search
MGDFEREKIRNICILAHVDHGKTTLADHLIAASVGNFLHPKQAGKMRYMDYLDEEQRRAI
TMKSSSIALQYKDHSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPCLVLNKIDRLITELKMTPMEAYTRLQRIVHEVNGIMSAYQSEKYLSDVDSL
IAGSVNETGDENFEFMEDDEEDTFQPQKGNVAFVCALDGWGFCIKEFAEFYASKLGASVG
ALQKALWGPRYFNPKTKMILGKKAIGSGSKAKPMFVQFVLEPLWQVYQAAYEPDGDKAVL
GKVIKTFHLSVPPRELENKDNKIVAQAIMSRWLPLSDAILSMVIRCMPDPVAAQSVRITR
LLPKRVVLNYAARPDVLEEAENVKKSVQACDASAEAPCVAFVSKMFAVPMKVLPRKGPNG
EAVNNYPDEGGVGESDECFLAFARIFSGVLHVGQKINVLSALYDPFKGEEAMQKHLQEAE
MHSLYLMIGQGLEPVAFARAGNVVAIRGLGHHILKSATLCSTRNCLPFSSMVFQVAPTLR
VAIEPTFPTDMAAVTKGLRLLNRADPFVEVSVSATGEQVLAAAGEVHLERCIKDLQERFA
KVSLNVSKPLVSYRETIEGDGSNFLDNMKVLTGGLDCVEKTTPNGRCVVRVQVVKLPPAL
TKLLDENSDLLGEILEGKPAQRNDKLLAAHREENSVDDNPIEALKKWITDAIEGHIASEK
LDKDKADKCRSVWLQLLQRIWALGPRYVGPNILLVPHAKEESGDHSVLIRGSPHVSQRLG
FIDEKTSDEDAAFEKSIEKSSSLFMEAESLKSSVLSGFQLATGAGPLCDEPMWGLAFIVE
ANVIPVENHSNESDVSTQLADQYGIFTGQIMTVVKEACRTAVLQKQPRIVEAMYFCELNT
PTEQLGSMYGVLNKRRARVLKEEMQEGSSLFTVHAYVPVTESVGFAKELREKTSGAASAL
LVLSHWEELSEDPFFVPKTEEELEEFGDGSSVLHNTARKLIDAVRRRKGLPVEEKVVQHA
TKQRTLSRKV
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggggattttgaaagagagaagattaggaatatttgtattctagctcatgttgatcat
ggtaaaactactttagctgaccatctaattgccgcttctgttggtaattttctccaccca
aaacaagctggtaaaatgagatatatggattatctagatgaagaacaaagaagagctatt
accatgaagagttcttcaattgcattacaatataaagaccattccattaatctaatagat
tctccaggacatatggatttttgtagtgaggtttctactgctgctagattaagtgatggt
gcattggtgttagttgatgctgttgaaggtgttcatatacaaacacacgctgttttacgg
caagcgtggattgagaaacttactccgtgtttggttttaaataagattgataggttgatt
acggagctgaaaatgactccaatggaagcgtatactagattacagaggatagttcacgag
gttaatggaattatgagtgcatatcagtccgagaagtatttgtcggatgttgattcacta
attgcagggtctgtgaacgagacgggtgatgagaattttgagtttatggaggatgatgaa
gaagatacttttcaacctcagaagggaaatgttgcgtttgtttgtgcgttagatggttgg
ggtttctgtattaaagagtttgctgaattctatgcatctaagcttggggctagtgtaggt
gctttgcagaaggctttatgggggcctcgttattttaatccgaaaacaaagatgattctg
ggaaagaaggcaattggttcaggaagtaaagcaaagccaatgttcgtgcagtttgtgcta
gagccactttggcaggtttatcaggcagcatatgaacctgatggagataaagcagtgctt
ggaaaagttattaagacatttcatttgtctgttcctcctcgtgaattagagaataaggat
aataaaattgtggctcaagctattatgagtcgctggcttcctttgtctgatgcaatcttg
tcgatggtaattaggtgtatgcctgatcctgttgcagcacagtctgttcgaatcacaagg
ttgcttcctaagcgagtggttctgaattatgcggccaggcccgatgtgcttgaagaagca
gagaatgtaaagaaatctgttcaggcatgtgatgcaagtgctgaagcaccatgtgttgct
tttgtgtctaagatgtttgctgttcctatgaaggtgcttccacgtaaaggtcccaatggt
gaagctgtcaataattacccagatgaaggcggggtcggtgaatcagatgagtgcttcctt
gcatttgcaaggatttttagtggggttcttcatgtagggcagaaaattaatgtgctttca
gctctctatgatccatttaaaggggaagaagcaatgcagaaacatctgcaggaagctgag
atgcattccttatatctcatgatagggcagggtttggaaccggtggcctttgccagggca
gggaatgttgtcgccatacgaggccttggtcatcacatcttaaagagtgcgaccctttgt
tcaactagaaattgtttgcctttttcgagtatggttttccaagttgctcctactctaaga
gttgctattgaaccaacttttcctactgatatggctgcagttacaaagggattgcgtctt
cttaacagggcagacccatttgtagaggttagtgtttctgccacaggagaacaagtgctt
gcagctgcaggagaggttcatctagaaagatgcataaaggatttgcaagagaggtttgca
aaggttagtctgaatgtctcaaaaccgcttgtatcatatagagagaccattgaaggggat
gggtccaatttcctagataatatgaaggtcttgactggtggcttggattgtgttgagaag
acaacccccaatggtcgatgtgttgttcgagtgcaggtagtaaagcttccgccagcactg
acgaagttgctagatgaaaattctgatctacttggagaaatcctagagggcaaacctgcg
cagagaaacgacaaactattggcagcacatagagaagagaattctgttgatgataatcca
attgaagcacttaaaaaatggataacggatgctatagagggtcacatcgcgagtgaaaaa
ctcgacaaggataaagctgataaatgtagaagtgtgtggcttcagttgctgcaaagaatc
tgggcacttggacctaggtatgttggtcctaacattcttcttgttccgcacgccaaagaa
gagagtggcgaccattcggttcttattcgaggttctccccatgtatctcaaaggttagga
tttatagatgagaagacaagtgatgaagatgcggcttttgaaaaatctatagaaaaaagt
agttcattgtttatggaagcagaaagtctcaagagcagtgtcttatctgggtttcagctt
gctactggagctggacctctgtgtgatgaacctatgtggggcttggcatttatagttgaa
gctaatgttattccagtggagaatcattccaatgaatctgatgtttctactcaactagca
gatcaatatggcatctttactgggcagataatgacagtagtgaaggaagcatgtagaaca
gctgtgcttcaaaagcaacctcgaattgtggaagccatgtatttttgtgaactgaacacc
ccaactgaacaattgggctccatgtatggtgttctaaataagagacgtgctcgagttctg
aaggaggagatgcaagaaggatcttctttgttcacagtgcacgcatatgtgccagttact
gaaagtgtagggtttgcgaaggagcttcgagaaaagacatcaggagctgcaagtgcctta
cttgtacttagtcattgggaagagctgtctgaagatcctttctttgtacctaagacagaa
gaagaacttgaagagtttggagatggttctagcgttctgcataacacagcaaggaagctc
attgatgcggtaaggaggcggaaaggtcttccagtggaagaaaaagtagtgcaacatgcc
accaagcagaggacactttctcgtaaagtgtaa
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