Papaver somniferum (opium poppy): 113347250
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Entry
113347250 CDS
T05758
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
113347250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113347250
03029 Mitochondrial biogenesis [BR:
psom03029
]
113347250
Membrane trafficking [BR:
psom04131
]
Autophagy
Autophagosome formation proteins
ULK complex
113347250
Atg1 complex
113347250
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
113347250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
113347250
NCBI-ProteinID:
XP_026446648
LinkDB
All DBs
Position
2:29836780..29841099
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AA seq
633 aa
AA seq
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MGTSSEPAKIEQIITEFFAKSLHIILESRTQPCSSSRNNYSGEQILLSSPSSSSSSSSSV
RPRDKWFNLALRECPASLENLELWHQSNLEPMVVDVLLFQRGPVNFHDDGAEMMKKDKVI
ERWVVKYETRKSGRDFGHGGNKRNPPSATSHSLYKKSIILLRSLYLTVRLLPAHKLFHEL
NSSGQILAYGLAHRVSTLVAPFTRREEVEMKEFVFTPVDTTCGRLCLSVLYSPALSDVNS
EPSTPVSPQFIPDYVGSPTTDRLKSFPSLPLARFRSHEIPSSVPFERRHSWSYDSYGSSA
PPVSGFPSPAYSDSRGFSYNPSSHRLPPLSIPSHQSETPGSSNASLATRNTNVDDFWPSP
MPSPTPSPSPPAHLKSKALLRSGSAPVSIPTTGNPALRNIHVATPSPPRAKMGPSQSSNG
RNLTRAGDVNSALKYEKMNSFGKDEVGNIYGAKASSGISSRISFSRSSSRFSSQDMFDYS
DFACPFAVGDDITDPRPGPDLSDGKAHHTEPRAQVRKSQDAAVGALVEMLSTAPPLRQDI
SKSIKLSQVSKPEIWGRSTEEPAVTLDSETGGLSNSSCNVNITSSGLLLSKTTADALEEF
QSYRQIKESLLLRNGNDGTSTNAGHASETADKS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggggacatcatctgaaccagcaaagattgaacagattataactgaattctttgcaaag
agtttacatataatattagagtcaagaacacaaccatgtagttcatcccgtaacaactat
agtggtgaacaaatattattatcatctccgtcatcatcatcatcgtcttcatccagtgtt
agaccaagagataaatggtttaatttagcattaagagaatgtcctgcttcattagaaaat
cttgaattgtggcatcaaagtaatttagaacctatggttgttgatgtgctactttttcag
agagggcctgttaattttcatgatgatggtgctgaaatgatgaaaaaagataaggtgatt
gagagatgggttgtcaagtatgagactaggaagagtgggagggattttgggcatgggggg
aataagaggaatcctcccagtgctacttcgcattctttgtataagaaatccattattttg
ttgagatctttgtatcttactgttaggttattgcctgcgcacaaattgtttcatgaattg
aattcatcggggcagatacttgcctatgggttagctcatagggtctctacgttggttgcg
ccatttactcgtagagaggaggtggaaatgaaggaatttgtgtttactccagtggatact
acttgtggtaggctttgtttgtctgtgttgtattccccagcgttgtctgatgtgaattca
gagccttcaactcctgtatcgccgcagtttataccagattacgtgggaagtccaacaact
gatcggcttaagagttttccgtctcttcctttagctagattcaggtctcatgagatacct
tcttcggtaccctttgagaggcgacatagctggagttatgatagttatggatcatctgca
cctccggtatctggctttccttcacctgcatattctgactctagaggtttttcttataat
cccagttctcaccgccttccacctttgagcataccaagtcatcaatctgaaactccaggc
tccagcaatgcatctttggctactaggaacacaaatgttgatgatttttggccctcacca
atgccctctccaactccatctccgtcaccacccgcccatttgaaatcaaaagctctatta
cgttctggaagtgctccagtaagcattcccacaactgggaaccctgcattgcgaaacatt
catgtagcgactccgtctcctccaagggcaaagatgggtccctctcagtccagcaatggt
aggaatttgactagagctggagatgttaattctgccttaaaatatgagaagatgaactcc
tttgggaaagatgaggttggaaatatatatggagcaaaagcatcatccggcatttcatca
agaatttctttctccaggagctccagtaggttttcctcccaggatatgtttgattattcg
gattttgcatgtccatttgctgttggggatgatataactgatccacgcccaggaccagat
ctttccgatggaaaagcgcatcatactgagcccagagcacaagtcaggaaatcccaggat
gctgctgttggtgcccttgtagagatgttaagtacagcaccaccacttcgccaagatatc
tcaaaatcgatcaagttgtcacaagtctcgaaacctgagatctggggaagaagcactgaa
gaacctgctgtaactttggattctgagacagggggattatcaaattcttcttgcaatgtc
aatatcacatcatctggacttctgttatcgaagacaactgctgatgcgttggaagaattc
cagagttacagacagataaaagaatcattgctgctcaggaacggtaatgatgggacctcg
actaatgccggccatgcatcagaaactgcagataaaagttga
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