Papaver somniferum (opium poppy): 113347363
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Entry
113347363 CDS
T05758
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
113347363
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
113347363
NCBI-ProteinID:
XP_026446787
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Position
2:35709869..35713903
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AA seq
700 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVIAVFVWAPEEEGHYYPGRVSRWWLKQSL
NHLDSSLKSLGTTLITKRSSDSVSSLIEIVKSTGATQLFFNHLYDPISLVRDHRAKELLT
DYGISVRSFNADLLYEPWEVNDDQGQPFTVFSDFWNRCLSMPCDPAAPMLPPKRIISGDT
SRCPSDELVFEDESEKGSNALLARAWSPGWSAGDKALTTFINGPLIEYSVNRRKADSATT
SFLSPHLHFGEVSVRKCFHLVRIKQVAWGNEGNTAGEESVNLFLKSIGLREYSRYMSFNH
PYSHEKPLLGHLKFFPWVIDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRMDNPQFEGYKFD
PNGEYVRRWLPELARLPTQWVHHPWNTPESVLQAAGVELGSNYPLPIVGLEAAKARLQEA
LSDMWQQEAAWRAAIENGTDEGLGESMESTPIAFPRDIQMEIDIEPTRNNNNTTPIVRHQ
EDQRVPSMTSSFLRIEEEEESSVDLRNSPEETRAEVPTNMNMGMDTRTEEPNQGGVQAIR
AVVNNARRFDNFGLQLQTADSSTAESSSSSRERDGGVVPVWSPSSSFSEQLVVEENGIGS
GSSYLQRHPQSHQIINWRRLSQTGGRSWEMDNMVQPNAIG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtgggtgtagtatagtttggtttagaagggatctaagagttgaggataat
cctgcacttgctgctggtgtaagggcaggtgctgtaattgcggtgtttgtatgggcacct
gaagaagaaggccattattatccaggaagagtatcaagatggtggttgaaacaaagctta
aatcatctagatagttctttgaaaagtcttggtacaacccttattactaaaagatcttct
gatagtgtttcttctcttattgagattgttaagtctactggtgctactcaactcttcttc
aatcacttatatgatccaatatcgctagtgagggatcaccgtgctaaggagcttctgact
gattatggcatatctgtgagatcgttcaatgcagatttgttgtatgaaccatgggaagtt
aatgatgaccaaggtcaaccattcacggtcttttctgatttctggaacagatgccttagc
atgccttgcgatccagctgcgccaatgttaccacctaagaggataatatcaggtgacaca
tcaaggtgcccttcggacgaactggtctttgaagatgaatccgagaaaggaagcaacgca
cttcttgctcgggcctggtcaccaggatggagcgctggagacaaggcactgacaactttt
atcaatggtcccttaatcgaatattctgtgaaccgtagaaaggccgacagtgcaacaact
tcatttctctctcctcatttgcattttggggaggtgagtgtaagaaaatgctttcactta
gtccgcatcaagcaggttgcctggggtaacgaagggaatacggctggtgaagagagtgtt
aatttgttcctcaagtctatcgggcttcgagagtattcaagatatatgagcttcaatcat
ccatacagtcatgaaaagcctcttcttggacaccttaagttcttcccttgggtaattgat
gaaggttatttcaaggcgtggagacaaggccgaacagggtatccgttggttgatgctggc
atgagagagttatgggctactggttggttacatgacaggataagagttgtggtttctagt
ttctttgttaaggttctgcagcttccatggagatggggtatgaagtatttctgggatacc
ttattggacgctgatcttgagagtgatgctcttgggtggcaatacatatctggcaccctt
cctgatggtcgagaatttgatcgaatggacaaccctcagtttgaaggttacaagtttgac
cccaacggagaatacgtccgacgttggcttccggaacttgctagactgcctacccaatgg
gtacatcatccatggaacacgccagagtcagtacttcaagctgctggggttgaactaggg
tcaaattatcctcttccgattgtgggattagaagcagcaaaagcccggttacaagaagca
ctatctgatatgtggcaacaagaggcagcctggagagcagcaattgagaatggaactgac
gaaggtcttggtgaatctatggaatcaacacccattgcgtttcctcgagatatccagatg
gagatcgatattgaacctactagaaataacaacaacactacacctatcgtcaggcaccaa
gaagatcaaagagtccctagcatgacttcttcatttctaagaattgaagaggaagaagaa
tcttctgttgatctgagaaactcacctgaagaaaccagagcagaagtaccgacaaacatg
aatatgggtatggatactcgtacagaagaaccaaaccaaggaggtgttcaagcgattaga
gccgttgttaacaatgctcggcggtttgacaatttcgggttgcaactgcaaactgccgat
tcctccacagcagaatcttcaagtagtagcagagagagagatgggggtgttgttccagtt
tggtctccatcttctagcttttcagagcaattagtggttgaagaaaatggtataggcagt
gggtcttcttatttgcagagacatcctcaatcacaccaaataatcaattggagacgactc
tcacaaacagggggaagaagctgggagatggacaatatggtgcagcctaatgcgatcggc
taa
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