Papaver somniferum (opium poppy): 113347684
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Entry
113347684 CDS
T05758
Name
(RefSeq) small RNA degrading nuclease 3-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113347684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113347684
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
RNases
113347684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Pilin_GH
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
113347684
NCBI-ProteinID:
XP_026447139
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All DBs
Position
2:complement(54358342..54363473)
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AA seq
433 aa
AA seq
DB search
MFKERLAAAEKDVLVSMVKIAQQRLMEGSKGVWQVFLNEHERKIGAGISDPSKRSVDVLA
SFLETFADPEAEAKFLEKVLECHSNREAVFELIQNSTTDREKLVRLSYENPDYSSSYSFK
SYEEDWVVTSMGDMSKSNEILAVDCEMVECEDGTEPVVKVCVVDENLKVKLNKLVNPNKP
VKDYRTEITGITAEDLEGVTCSLADVQKSLEKLLSDGTILVGHSLDCDLKALKLDHGRVI
DTSLVFRRADGKRTSLSDLCKVVLKRDVREEGAQHNCLDDAGAAMKLVKNVLEKGYDEAM
KVFRDYLSKQLFLYRIPVDLSEDELRAIVPMDSAVVLKLRYQQRAKTYSATAFFKDQDEA
NYTFQSIECEEAKDTNGLQQKLILDQPKNEKCASGCIHVRKMVRDDDSPVPDSSLRKRQI
KESCRTQQRRAAE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaggagagattagctgctgcggagaaggatgttctcgtttccatggtgaaaatt
gcacaacaacgtctaatggaagggtccaaaggagtttggcaggtttttctgaacgaacat
gaacgaaagattggagccggtataagtgatcccagtaagaggtctgttgatgtcttggct
tcgtttcttgaaacctttgctgatccagaagcagaagccaagttcttggagaaggtattg
gaatgtcattcaaatcgggaagcagtgttcgaattgatccagaatagtactacagatcgc
gagaagctggttcggttatcatatgaaaacccagattactcatcgagctattcgttcaaa
tcttatgaagaggactgggtagtaacaagcatgggtgacatgtctaaatccaatgaaatt
cttgctgttgattgtgagatggttgagtgcgaagatggaacagaacctgtagtaaaagtg
tgtgttgtagatgaaaatttaaaggttaaactgaataaactggtgaaccctaataaacct
gtcaaggattatagaactgagattactggaatcactgcagaggatttggaaggagttaca
tgttcgttagctgatgttcagaaatcgctggaaaagctcttgtccgatggaactatattg
gttggtcacagcttggattgtgatttgaaagcattgaaactggatcatggacgggttatt
gacacatcactagtcttcagacgtgcagatggcaagagaacttcattaagtgatctgtgc
aaggttgtcctcaaacgtgacgttagggaagagggtgctcaacataattgtctggatgat
gcaggtgctgcaatgaaactagtgaagaatgtgctggaaaaaggatatgatgaagccatg
aaggtatttcgtgattatctgtcaaagcagctttttctttacaggataccagttgattta
tctgaggatgaattgcgtgcaatagtaccaatggactctgctgttgtacttaaactgaga
taccaacagagagcaaagacatattctgctactgcctttttcaaagatcaagatgaggca
aattacacgtttcaaagtatagaatgcgaggaagcaaaggatacaaatggtctgcaacag
aaacttatcttagatcaacctaagaatgagaagtgtgctagtggctgtattcatgttcgt
aaaatggttagagatgatgacagtcctgtgccagattcttctttaagaaagagacagatt
aaagaaagctgtagaacccagcaacgaagagctgcagaataa
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