Papaver somniferum (opium poppy): 113347711
Help
Entry
113347711 CDS
T05758
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113347711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113347711
03036 Chromosome and associated proteins [BR:
psom03036
]
113347711
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113347711
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113347711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
113347711
NCBI-ProteinID:
XP_026447167
LinkDB
All DBs
Position
2:complement(55956495..55962250)
Genome browser
AA seq
970 aa
AA seq
DB search
MFTYGFTDFSNGSSAFGSISSQPTPLESSTSGFSNGGSPSIQLALDDSTTLETSTSEVSN
NASPLSIQCEVGTIVPASSISSFPNNASPSIEPAVDSNTPGSSISDFSNNVGPSIQPEVG
TIAPVSSFTATGSLGSVATEVAFGNVGSSAFGSTSSQPTPLESSACDFSDNGCPSIQSEL
VSTALASSTSDLSNNGGPSIQPELGTVAPASSTSDLLNNGSPSIEPAMDSTAPVSSTADL
LNNGGLSIQPAVVDSPTPASSISRFSNNAGPGLSIQPAVGSITPTPVSPLADTTSLNIGG
TKVAIGYAAFGNVGSSTVFGYPPSQPSPSGSSSSFCTTASPSIQHGSSLFGQKPAFGGFW
STTPSLSSPFGGSNFQQIQSAFGSIPFGSSAPFGAPSQHSFGTSSIPGFRVTSTPAFSAP
TTAAFSAGTASAFGSQPTAAFGAATTSAFGSRPTATFGSGGVFGTPAFSSTSIPAFGATT
AASTFGTSNTPFGAQPFSFVTSPAFGQTNSGFGSSPFGSTLSAFGAQSSTFGTQTTTPST
FGSPGAFGQPGFSVGQQQHGGSKVVAYAPTAETDDTGAQSSGKFESISAMPVYKEKSHEE
LRWEDCQLSDKGSSSVFGSCPSQTSPFESSSSFITTAANTETQHARGNVAPDPVASHGSW
IIPPYASSGDRSWTPSRQAEPHPMLLSISAMPVYVDKSPEELRWIDYQVGDIGGWVQKHG
IQLKCVPRTPFGNNISCNSAPAFGSAFTTSNQPPAWGNFQSSIFPPRGGFQSQSWISGSP
SPASGFLRPTFGVPTASVFESSGFESATPYVRPRWGSRVASYTSTAEATGYPLSNAFEQI
NEPTMDKAKREGKELDASSSTYFPVPQDKNEGKPLDASSSTHCPEPQHKKQGKQTDKKKM
QDVRKAVEVECSTRHCPEPRDKEHGKQTDKKKMQDLRKAVEVECEVERRVSVKHIAFLTS
MLEKLDSLNI
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgttcacatacggtttcactgattttagtaatggatcttctgcatttgggtctatttct
agtcaaccgactccattagaaagcagcacatctggattctccaacggtggtagtccatca
attcaacttgcactggatgattctactactctagaaaccagtacatctgaagtctcaaac
aatgctagtccattatcaattcaatgtgaagtgggtactattgttccagctagcagcata
tcttcttttccgaacaatgctagtccttcaattgaacccgcagtggattctaatactcct
ggaagcagtatatctgacttttctaacaatgttggtccatctattcaacctgaagtgggt
actattgctccagtaagctccttcaccgctaccggttcattgggcagtgttgctacagaa
gttgcttttgggaatgttggatcttctgcatttgggtctacttctagtcaaccaactcca
ttagaaagcagtgcatgcgatttctcagacaatggttgtccatcaattcaatctgaactg
gtttctactgctctagcaagcagtacatcagacttgtcgaacaatggcggtccatcgatt
caacctgaattgggtactgttgctccagctagcagcacgtctgacttgttgaacaatggt
agtccatcaattgagcctgcaatggattcgactgctccagtaagcagcacagctgacttg
ttaaacaatggtggtctatcaattcagcccgcagtggtggattctcctactccagcaagc
agcatatctagattctcaaacaatgctggtcctggtctatcaattcaacctgcagtgggt
tctattactccaactccagtaagccccttagccgataccacttcattgaacattgggggt
acaaaagttgctatcgggtatgctgcttttgggaatgtcgggtcatctactgtctttggg
tatcctcctagtcaacctagtccatcaggaagcagctcatcattctgcaccactgctagt
ccatcaattcaacatgggtcttctctatttggccagaagcctgcttttggtgggttttgg
tcaactactcctagtctgtcaagtccatttggcggtagcaatttccaacaaatccagtct
gcatttggaagcattccatttggttcatctgctccttttggtgcaccaagtcaacattca
ttcggtaccagtagcatccctggtttcagagtgacaagcactccagctttcagtgctcct
actactgcagccttcagtgctggaacagcatcagcctttgggtctcaaccaactgcagcc
ttcggtgctgcaactacatcagcctttgggtctcgaccaactgcaacgtttgggtcagga
ggggtatttggcactccagcattttcttccacaagcatccctgcttttggtgctacgact
gctgcttccacatttggaacgtcaaacactccttttggtgcccaaccttttagttttgta
acgagccctgcatttggccaaacaaattctggatttggtagcagcccttttggttcaact
ctgtctgccttcggagcccaaagttctaccttcggtacccagactacaacaccctctaca
tttggatctccaggagcctttggacagccaggatttagtgttggtcaacaacaacatggt
ggaagcaaagtagtggcttacgctcctacagctgagactgatgatactggtgcacagagt
tccggaaaatttgaatcgatatcagctatgcctgtttataaagagaaaagtcatgaagaa
ctgaggtgggaagattgccagttgagtgataaaggatcatcttctgtctttgggtcgtgt
cctagtcaaactagtccatttgaaagcagctcatcattcatcaccactgctgctaataca
gaaactcaacacgcacggggtaatgtagctcccgatccagttgcttcacatggtagttgg
ataattcctccatatgcctcttcaggtgaccgttcatggacaccaagtaggcaggctgaa
cctcatccaatgcttctatcaatatcagctatgccagtctatgtagataaaagtcccgag
gagttgagatggattgattatcaagttggagacataggtggatgggttcagaaacatggc
attcagcttaaatgtgtccctcgtacaccttttggtaataatatttcttgtaactctgct
ccagcttttggttctgccttcacaacatcaaatcaacctccagcatggggtaattttcaa
agttcaatatttcctccaaggggtggttttcaaagtcaaagttggatatctggatcgcct
tcacctgcatctggcttcttgcgtcctacatttggtgttcctactgcatcggtatttgaa
agttcaggttttgagtccgcaaccccatatgtcagaccacgctggggcagcagagtagcg
agttacacctcaacagcagaggctacaggctacccactgtcaaatgcattcgagcagata
aatgaacctacgatggacaaagctaagcgtgaagggaaggaacttgatgctagcagcagt
acatacttcccagtaccacaagacaagaacgaagggaagccgcttgatgctagtagcagt
actcactgcccagaaccacaacataaaaaacaaggcaaacagacggacaagaagaagatg
caagatgtacgaaaggcagtcgaagttgagtgcagcactaggcactgcccagagccacga
gataaagaacacggcaaacaaacggacaagaagaagatgcaagatttacggaaggcagtc
gaagtggagtgcgaagtggaacgccgtgtgtcagtgaaacatatagctttcttgacttcc
atgttagagaaactagacagtcttaatatttga
DBGET
integrated database retrieval system
