Papaver somniferum (opium poppy): 113348143
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Entry
113348143 CDS
T05758
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113348143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113348143
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113348143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
EXOC6_Sec15_N
TPR_9
FAN1_TPR
PrmA
Motif
Other DBs
NCBI-GeneID:
113348143
NCBI-ProteinID:
XP_026447633
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All DBs
Position
2:complement(79267938..79277879)
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AA seq
866 aa
AA seq
DB search
MASEPDMSSWTDLLHSSTKLLEQAAPSAQFPALQRNLDQLEALSKKLKSKTVRTEVPAES
NAATRLLAREGINAEQLARDLKSFELKTKFEDVFPAEATSVEEYLQQVHEMAMVTAIQEA
QKDNVRSFNDYMVKVLEEDWQKEKWDFLQGLSRLSTLPRASGSVGTVINSPGEMASIASS
PRVSTGTTGMELIPSANNEPILEMKASVYAEVVRKLNDARERALPFKPATAFRGAYETLG
LDVSGGKSVTVQKIWHLIQALVGEDSAVKHNVSRKMSLVIGARRHLERGHEKYILDTIQS
HPAQAALGGVVGNLQKIRAFLRIRLREYGVLDFDASDARRQPPVDTTWQQIYFCLRTGYY
DEARNVALSSRASHQFAAQLAEWISTGGMVSQETAAAATEECEKMLRMGDRIGRPAYDKK
KLLLYAIISGSRKQIDWLLRDLPTIFNTIEDFLWFKLSAVRDRPGGGAASSSAILNETMV
PYSLDDLQVYLNKFEPSYYTKNGKDPLVYPYVLLLSIQFLPAVLYLSKETGDGGFNIDAV
HISIVLADHGVLSDGAGTGPKLGLMDAFAEAASMIRQYGSAYLHSDNLSAALEYYAQAAS
AMGGGELSWTGGGNSNQQRQRQLMLKQLLTELLLRDGGISLLLGARGAGEEGQLRRFLND
RTAQQQFLLEAARQCQEAGLYDKSVEIQKRIGAYSVALETINKCLSESICALSRGRFDGD
SQTSGLIQKANEILEAYKYSHESSLHDREHILEQQTVLRQLEAVLFIHKLAKSGQYADAL
RELMKLSFLPLDPRSQDISVDVFPKLALHVQACVPDLLKVALSCLDNVADSDGLLRALRI
KIANFVANNMARNWPRDLYEKVARTL
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaccagacatgagtagttggacggatcttcttcattcttctactaaactt
ctcgagcaagctgctccatctgcccagttccctgccttacagagaaacttagatcaatta
gaagcgttatcaaagaagcttaaatctaaaactgtacgaactgaagttcctgcagaatct
aatgcagccaccaggctgttagcgcgtgaagggataaatgccgaacaacttgcacgggat
ctcaagtcttttgagttaaagactaaatttgaggatgtcttccccgctgaggcaacaagt
gttgaagagtatttgcaacaggttcatgaaatggccatggtcacagctattcaggaggct
cagaaggataatgttagaagctttaatgattacatggtgaaagttttggaggaggattgg
caaaaggaaaagtgggattttcttcaaggcttgagtcggctttctacacttcccagagca
agcggtagtgtaggcacagtgattaatagtcctggtgaaatggcttccattgcttctagt
ccaagggtttctactggtacaacaggcatggagctcataccttcagcaaataatgagcct
atcctcgaaatgaaggcttctgtatatgctgaggttgttaggaaactaaacgacgcaaga
gaacgagccttaccatttaaacctgctactgctttcagaggtgcttatgaaactttagga
cttgacgtgtctggtggaaaatcagttactgtgcagaagatatggcacttaattcaggca
ttagtaggtgaagactcagctgttaaacacaatgtatcaaggaaaatgtcattagtaatt
ggtgcaagaagacatctggaaaggggacatgagaagtatatccttgatacgatccaaagt
caccctgcacaggctgctcttggcggggttgtggggaacctgcagaaaattcgtgccttt
ctccggatccgtttgagggagtatggggttctagattttgacgcaagcgatgcacgcagg
cagcctcccgttgatacgacttggcaacagatttatttctgcttgcgaactggttattat
gatgaggctagaaatgttgctttgtcatctcgtgcttcacatcaatttgctgctcagctt
gctgagtggatttctactggaggtatggtgtcccaagagactgcagctgctgctacagaa
gaatgtgagaaaatgttgaggatgggggatcgaattggtcgacctgcgtatgacaagaaa
aagttactactttatgctatcatatctggttcacgcaaacagattgactggttgcttagg
gatctaccaacaattttcaatactatcgaggatttcttgtggttcaaattgtcagcagtt
cgagatcgtccaggtggtggagctgcttcctcctctgctattttgaatgagaccatggta
ccttacagtttagacgatctgcaggtttaccttaataagtttgagccttcgtattacaca
aagaacgggaaggatccgttagtgtacccttacgtattacttttgagcatccagtttttg
ccagcggttctatacttatccaaggaaactggagatggaggattcaatatcgacgcagtt
catatttcaattgttctagcagatcatggggttctttcggatggtgctggaactggtcca
aagctgggtctaatggatgcttttgctgaagctgctagcatgattcgccagtacggttcg
gcatatttgcattcagataatctctcagcggcactagaatattatgcacaagctgcttct
gcaatgggtggtggagagttatcttggactggaggaggaaacagcaatcagcaaagacag
agacaattgatgctcaagcaactccttactgagctattattacgtgatggtggcatatct
cttttgcttggtgcaagaggtgctggcgaggaaggtcaacttaggaggtttctaaatgac
agaacagcacaacaacagtttttgcttgaagctgctcgccaatgccaggaagctgggcta
tacgacaaatctgtagaaatacaaaagagaattggggcctattcagtagcactggagaca
ataaataagtgcctctcagaatccatttgtgctctctcacgtggtagatttgacggtgac
agtcagacttctggtctcattcaaaaagcgaatgagatattggaagcttacaaatactca
catgaatcaagcctgcatgatagagagcatattttggagcagcaaacagtgttaagacag
cttgaggcggtattgtttatccataaactagctaaatcaggtcaatatgcagatgcttta
agggagctaatgaagctgtcattccttcccttagatccgcggtcacaagatatctcagtt
gatgtgtttcccaagttagcattgcatgtccaagcttgtgtgccagatctcctgaaggtt
gctcttagctgtctagacaatgtagcagattcagatggactactgcgcgccttacggatt
aagattgccaattttgttgcaaacaatatggcgaggaactggccccgcgatttgtacgaa
aaggttgcacgaaccctttga
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