Papaver somniferum (opium poppy): 113348208
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Entry
113348208 CDS
T05758
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113348208
Enzymes [BR:
psom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
113348208
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
113348208
Prokaryotic type
113348208
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
113348208
NCBI-ProteinID:
XP_026447699
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Position
2:complement(82716214..82721998)
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AA seq
987 aa
AA seq
DB search
MPQIGSFKLFLPTKYSSHSLFRLNSFPPFSLFSKPKTKTLSKPFSPLTTTTTVFSYSPGK
QQRNTPPLRIRDNSTLREVKKRELGKEKEPMKEANEAAGFNKRRAEGRDKNDKPKTLQLK
NRKLNPVNTCCYVQVLGTGLDTQDTSPSVLLFFDRQRFIFNAGEGLQRFCTEHKIKLSKI
DHIFLSRVCSETAGGLPGLLLTLAGMGDEGMSVNVCGPSDLQYLVDAMRSFIPKAAVVHT
RSFGPSLISDGASISESETFAEPIVLIDDEVVKISAILLRPSCCSSSNSQDSDTENVAVL
KPGDISVIYVCELPEINGKFDPEKAKALGLKPGPKLRDLQLGKSVMSDFQDITVHPSDVM
GPTIPGPIVLLVDCPTLSHLRDLISLQSLNSYYDGVKIVSCVIHLSPSSVTMTAEYDTWM
RRFDGAQHIMAGHQKKNMEIPILKSSARMAARLNYLCPNFFPSRGFWDHQHLINGNPDII
ASSVVSVPNPSESVAAENLLKFHLRPYSHFGLDKSSIPELLTSAKAIDELLLEIPEIVDA
VSEVSHLWNKIGDAKELILSPEQNIIMMEEPWMDENASVLDKNLGKQGSDAALKEIPRSV
NTDDLNHDSSLPSCLENMTREEMEIVLLGTGSSQPSKYRNVTSIFINLFSKGGLLLDCGE
GTLGQLKRRFGVTGADDAVKGLKFIWISHIHADHHTGLARILALRCQLLKGTVHEPIIVV
GPRQLKRFLDAYQRLEDLNMQFLDCGHTTDAKWEGFESQSFLRSAKEEVNKDDGVKEIAQ
NLETSLFVKGSRMESYWKRPGNPGETTGVFEIQQKLKKVLGEAGLGALISVPVVHCPQSF
GVVLEAASRLNNEGKTIPGWKLVYSGDTRPCQELKDACQGATVLIHEATFEDTMVDEAIA
RNHSTTMEAIEVGEGAYRIILTHFSQRYPKIPVFDETHMHKTCIGFDMMSVNLADLPVLP
KVLPHLKLLFKNEMIVEESDDTVDSET
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaatcgggagcttcaaactattcctcccaaccaaatactcttctcattctctc
ttccgccttaattcctttcctcccttttctctattttctaagcctaaaaccaaaaccctt
tctaaacccttttctcctctaaccaccactaccactgtcttctcttattctccaggaaaa
cagcaaagaaacactcctcctttgaggattagagataacagtactctcagagaagttaaa
aagagagagttagggaaagagaaagaaccaatgaaggaggctaatgaagctgctgggttc
aataaaagaagagctgaaggaagagataaaaatgataaacccaaaacccttcagttgaaa
aatcggaaactgaaccctgtcaacacttgctgctatgttcaggtattgggaactggatta
gatacgcaagatacttcaccatcagttttgctgttctttgataggcagaggtttattttt
aatgctggagaggggttgcaaaggttctgcacagagcacaagattaagttatccaagatt
gatcacatattcctttctcgtgtctgctcagaaactgctggtggactaccaggtcttttg
ttgactttggctgggatgggagatgaagggatgtcagttaacgtatgtggtccctctgat
ctccaatatttagttgatgctatgagatctttcattccaaaggcggcagtggttcatact
cgtagctttggaccttctttgatttctgatggagcttcaatctccgagagtgaaacattt
gcagaacctatagttttaattgatgatgaggttgtgaagatatctgctatccttttaaga
ccaagttgttgctcatcatcaaattcacaagattcagacacggaaaacgtggcagtgcta
aagcccggcgatatttctgttatatatgtctgtgaattacctgagatcaacggaaagttt
gatccagagaaagctaaggcccttggactgaaacctggacctaaacttcgtgatctgcaa
cttggaaaatcagtcatgtcagactttcaagatatcacagttcatccaagtgatgtgatg
ggtcccacaattcccggccctattgtgctccttgtggattgccctaccctctctcatttg
cgggacttgatatctctacaatctctgaatagttactatgacggtgttaagattgtgagt
tgtgttattcacctgagtccatcatctgtcacaatgactgctgagtatgatacttggatg
agaagattcgacggagcccaacatatcatggctggacatcaaaaaaagaatatggagatt
ccaattctaaaatcaagtgcaagaatggcagctcgacttaattatctttgtcccaacttc
tttccttcacggggattttgggatcatcagcatcttatcaatggtaacccagatatcata
gcatcaagtgtggtttctgttccaaatccatctgaaagtgttgctgctgaaaatcttctt
aagttccacttgcgtccttactcacattttgggttggataaatcttcgataccggagttg
ttgacttctgcaaaggcaattgatgagcttctcttagaaatccctgagatagtagatgct
gtaagtgaagttagtcatctatggaataagattggagatgctaaagagttgatactttcg
ccggagcaaaatattattatgatggaagaaccatggatggacgagaatgcttctgttctt
gataaaaacttaggaaagcaaggttcagatgcagctctaaaggagattccacgtagcgtc
aacacggatgaccttaatcacgactctagtcttcctagttgtttggagaacatgacaaga
gaagagatggagattgttcttctaggaacaggttcatcccagccatcaaaatatcgcaat
gttacttccatcttcattaatcttttctctaaaggaggtttgctcctagattgtggcgag
ggaactctaggacaattgaaaagaaggtttggtgtaacgggtgctgatgatgctgtgaaa
ggtttaaaatttatctggatttcacatattcatgcagatcatcacaccggtcttgcaaga
attcttgccctcagatgccaattgttaaaaggtacagttcatgaaccaataattgttgtt
ggaccaaggcaactgaagagatttttggatgcataccaaaggctcgaggatctaaacatg
cagttcctcgactgtggtcatacaacggatgctaaatgggagggttttgaaagtcaatct
tttctgagaagtgcaaaggaagaggtaaataaggatgatggggtgaaagaaatagctcaa
aatttggagacgagtttatttgttaaaggaagccgcatggagagttactggaagagacca
ggaaatcctggtgaaacaactggggtttttgaaattcaacaaaagttgaaaaaggttcta
ggtgaagcaggtctgggagctctgatcagtgttcctgtcgtgcactgtcctcagtcattt
ggcgttgttctagaggctgcatctagacttaataatgaaggtaaaactatacccggttgg
aaacttgtttactctggtgacaccagaccttgtcaagaactgaaagacgcgtgtcaagga
gctactgttcttatacacgaggcaacgtttgaggacactatggtggacgaagctatagca
aggaatcacagtacaacaatggaagccattgaagttggagaaggtgcatatcggatcatc
ctcacacattttagtcaaaggtatccgaagattccagtttttgacgagacacatatgcat
aaaacatgtattggttttgatatgatgagtgttaacttagcagatttgccagtgcttccg
aaggttcttccacacctcaaactcctatttaaaaatgaaatgattgttgaagaatctgat
gatactgtagactctgaaacctga
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