Papaver somniferum (opium poppy): 113348315
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Entry
113348315 CDS
T05758
Name
(RefSeq) coatomer subunit beta'-1-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113348315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113348315
Membrane trafficking [BR:
psom04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113348315
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113348315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_WDR75_2nd
TPR_1
Beta-prop_DCAF12
WD_LRWD1
TPR_2
TPR_GEMI5
Clathrin
HEAT_GCN1
Tn7_TnsA-like_N
Motif
Other DBs
NCBI-GeneID:
113348315
NCBI-ProteinID:
XP_026447815
LinkDB
All DBs
Position
2:87891472..87900758
Genome browser
AA seq
922 aa
AA seq
DB search
MPLRLDIKKKLAQRSERVKSVDLHPSEPWILASLYSGSVCIWNYQSQTMVKSFEVTELPV
RSSKFIARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVISSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVEYFTGGDKPYLITGSDDQTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE
LPIIITGSEDGTVRVWHATTYRLENTLNYGFERVWAVGCMKGSRRIVIGYDEGTIMIKIG
KEVPVASMDSSGKIIWAKHNEIQTVNIKSVGADVEVTDGERLPLAIKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIAWSLDGEYCVRESTSRIKIFSKTFQ
EKKSVRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNVYWADSGDLVAI
ASDTSFYILKYNRDNVSSYLDGGKPTDDQGVEDAFELLHETNERVRTGLWVGDCFIYSNS
TWRLNYCVGGEVTTMFHLDRPMYLLGYLASHSRVYLIDKQFNVIGYTLLLSLIEYKTLVM
RGDLERASQILPSIPKEHHNSVAHFLESRGMLEDALEVATDPNYRFDLAVQLGRLDVAKA
IAVEVKSESKWKQLGELAMSSGKLEMAEECLQYAMDLSGLLLLYSSLGDSKGITELASLA
KEQGKNNVAFLCLFMLGKLEECLQLLVDSHRIPEAALMARSYLPSKVSEIVALWRKDLNK
INLKAAESLADPEEYSNLFEDWQIALSVETKVAEKRGSYPPAVEYVSYSERTNVNLVESF
KNMQLEEGEEEEEAPQENGDVDHEEAKENGEEGQDENGENGEEEGQEEAVEVDADSIDGA
VLVSGKEAEEEWDPNNDGTLSA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactagatatcaagaaaaaactagctcaaagatctgaaagagttaagtct
gttgatcttcatcctagtgaaccatggattctggcgagtctttattcaggaagtgtctgt
atctggaactaccagtcacagacgatggtaaaatcttttgaggttaccgagttaccagtt
cgatcttctaaatttattgcacgtaagcaatgggttgttgctggggctgatgacatgtac
attcgtgtttacaattataacacaatggataaagttaaggtgtttgaagcacacactgac
tacattaggtgcgtggccgtccacccaacacttccatatgtgatatcatcatctgatgac
atgctcataaagctctgggactgggagaaaggttggatgtgcactcagatttttgagggg
cactcacactatgtgatgcaagtaacatttaatccaaaagacaccaacacttttgcaagt
gcctctcttgaccgcacaataaagatttggaatcttggctctcctgatccaaattttaca
ctggatgcacatttgaaaggggtaaattgtgttgaatatttcactggcggtgataaaccg
tatctgattactggctctgatgatcaaactgcaaaggtgtgggattaccaaacaaaaagt
tgtgtccagacactagaaggtcatactcacaatgtttcggccgtttccttccacccggaa
cttcccataattattacagggtccgaggatgggacggtccgggtatggcatgcgaccact
tataggcttgagaacacattgaactatggttttgagcgagtttgggccgttgggtgtatg
aaaggttcacggaggattgtaatcggatatgatgaaggcaccattatgataaagatcgga
aaagaagtaccagttgcaagtatggacagtagcgggaaaatcatatgggctaagcataat
gaaattcaaacagtgaacattaaaagtgttggagcagatgtcgaggtcactgatggagaa
agattacccctggctataaaagagttgggaacatgtgatctttacccccaaagcttaaag
cacaacccaaatgggaggtttgttgttgtctgcggggatggagagtatattatatataca
gctttagcatggagaaatagatcttttggctctgcattggaaattgcctggtcactagat
ggcgagtattgtgtcagagaaagtacatcaaggattaagatcttcagtaaaacttttcag
gaaaagaaaagtgttcgaccaacattttctgctgagcgtatttttgggggaactttgctg
gcgatgtgctcaaatgactttatctgcttttatgattgggctgaatgcaggttaattcgc
cggattgatgttaatgtcaaaaacgtttactgggctgatagtggtgacttggtggcaatt
gctagtgatacttcgttctacatcctcaagtacaatagagataatgtatcttcatatttg
gatggtggaaaaccaactgatgatcagggtgttgaagatgcttttgagcttctccacgaa
acaaatgaacgggtcagaacaggattatgggttggggattgttttatatacagtaactct
acttggagacttaactactgtgttggtggcgaggtaactaccatgttccaccttgatcgt
cctatgtatttgctgggttatcttgcaagtcacagtcgggtttatctcatagacaaacag
ttcaatgttattggatataccctacttctcagtttgattgagtacaagactcttgtgatg
cgtggagacctggaacgggccagtcaaattctaccgtctattcccaaggagcaccataat
agtgtggctcatttcttggagtctcgtggtatgctagaggatgcgcttgaagtagctact
gatccaaattacagatttgatttagctgttcagcttggaagactagatgttgcaaaggcc
attgctgttgaagtaaagagtgaatcaaaatggaaacaattgggagaattagctatgtcc
tccggaaagttggaaatggctgaggaatgtttgcagtatgccatggatttgagtggtttg
ttgcttttatattcttctcttggagactcaaagggaataacagaacttgcatcacttgct
aaagagcaagggaagaacaatgtagcatttctttgcctatttatgcttggtaaattagaa
gagtgtctccagttattggtcgacagtcaccgtatacctgaggctgcgttgatggcgcgg
tcatatcttcctagcaaggtttcagagatagtagcactttggagaaaagatctgaataag
attaacctaaaagctgctgagtccttggctgatcccgaggaatactctaacttgttcgag
gattggcaaatagccttgtccgttgaaaccaaagttgcagagaaaaggggttcttatcct
cctgccgtagaatacgtaagttattctgaaagaacaaatgtcaaccttgtggaatcattt
aaaaatatgcaactggaagaaggagaagaagaagaagaggcaccccaagaaaatggagat
gtggatcatgaggaggcaaaggagaacggagaagaagggcaagacgagaatggagaaaat
ggagaagaagagggacaagaagaggctgttgaagtggatgccgattctattgatggtgct
gtgctagtcagtggtaaagaggctgaagaagagtgggatccgaataatgacggaacactt
tcagcctaa
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