Papaver somniferum (opium poppy): 113348434
Help
Entry
113348434 CDS
T05758
Name
(RefSeq) serine--tRNA ligase-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113348434
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psom01007
]
113348434
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113348434
Enzymes [BR:
psom01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
113348434
Amino acid related enzymes [BR:
psom01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
113348434
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113348434
Prokaryotic type
113348434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TMF_TATA_bd
NET2A
Motif
Other DBs
NCBI-GeneID:
113348434
NCBI-ProteinID:
XP_026447989
LinkDB
All DBs
Position
2:complement(93605197..93608703)
Genome browser
AA seq
445 aa
AA seq
DB search
MLDINLFREDKGGNPEIIRESQRRRFGSVELVDEVIRLDIEWRQRQFELDNLRKDLNKIS
KEVGKLKISGEDATGKIKSSEECKQSIAAKDAEVQAAKDLLYSKLDLIGNLVHDSVPVDN
DEANNLVVRTWGEKRTEPKLKNHVELVELLGIADLKKGANVAGGRGFYLKGVGVLLNQAL
INFGFAFLGKRNYTLLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAYHLDDWIHPTQLPIRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCMTSPNATD
SWEMHEEMIKNSEDFYKELNLPYQVVSIVSGALNDAAAKKYDLEAHFPASNAYRELVSCS
NCTDFQSRRLEIRFGQKKSNDQVKQYCHLLNSTLTATERTICCILENYQKEDGVEIPAAL
QPFMGGLTFIPFQTPPTVEGKGKKK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgttagacatcaatctatttagagaagacaaaggaggcaacccagaaatcatccgcgaa
tctcaacgtcgaagatttggaagtgttgaactcgtcgatgaggttatacgcctagacata
gaatggcgtcaacgtcaattcgaattggataatttgaggaaagatttaaataagatcagc
aaagaagttgggaaacttaaaatttctggtgaagatgctactggaaagattaaaagctca
gaggagtgcaagcagtcgatagctgccaaggatgctgaagtacaagcagcaaaagatttg
ttgtattctaagttggatttgattggaaacttagttcatgattctgttcctgttgacaat
gatgaggctaataatttggtagtccgaacatggggagagaaaaggacagaacctaagttg
aaaaatcacgttgaacttgttgagcttcttggaattgctgatctcaagaaaggtgctaat
gttgctggaggaagaggtttctacttgaaaggagttggggtacttcttaatcaggcactt
atcaattttggttttgcattcttgggaaagcggaactatacccttctacaaactccattc
ttcatgagaaaagatataatggcaaagtgtgctcagctagctcaattcgacgaagaactt
tacaaagtcacaggtgagggagatgataagtatctgattgccacagctgaacagccactg
tgtgcatatcatctagatgattggatccatcctacacaactgccaataagatatgcaggg
tactctacttgtttccgcaaagaagctggttcacatggtcgagatactttaggtattttc
cgagttcatcagttcgagaaggtagaacaattttgcatgaccagcccaaatgctaccgac
tcctgggaaatgcacgaggaaatgattaaaaactctgaggacttctacaaggagctaaac
ttgccctatcaagttgtttccattgtttcgggtgctttgaatgatgcagctgcgaagaag
tacgatcttgaagcacattttcctgcctcaaatgcatacagagagctagtttcttgctca
aactgtaccgacttccagtctagaagattggaaatccgatttgggcagaaaaagagcaat
gaccaagtgaaacagtactgtcacctgctaaactcaaccctgacagcaacagagaggacc
atttgttgcatccttgagaattatcagaaggaagatggtgttgagattccagcagcttta
caacccttcatgggtggcttgaccttcatcccgttccaaactcctccaacagttgaaggc
aaagggaagaaaaagtag
DBGET
integrated database retrieval system
