Papaver somniferum (opium poppy): 113348500
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Entry
113348500 CDS
T05758
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113348500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113348500
03036 Chromosome and associated proteins [BR:
psom03036
]
113348500
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113348500
Coactivators
SAGA/TFTC/STAGA complex
113348500
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113348500
STAGA complex
113348500
TFTC complex
113348500
SAGA complex
113348500
SLIK complex
113348500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
113348500
NCBI-ProteinID:
XP_026448086
LinkDB
All DBs
Position
2:complement(97186051..97191443)
Genome browser
AA seq
537 aa
AA seq
DB search
MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTVLTADD
VDSALKLRNVEPMYGFASGDPLRFKRAVGHKNLFYIDDKDVEFKNVIDAPLPKAPLDTAV
LAHWLAIEGVQPAIPENAPVEALVAPSDTKKSEHKDDGLPADIKLPVKHILSRELQLYFD
KITELTVSKSNSILFKEALVSLATDSGLHPLVPYFTYFIADEVTKSLSNDFPLLFALMRV
VLSLLQNPHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRDFAANIVASVCKRFGH
VYHNLQPRVTRTLLHAFLDPTKAMTQHYGAIQGLAALGPSVVRLLILPNLEPYLKLLEPE
MLLEKQKNEMKRHEAWRVYGALLCAAGQCMYERLKLFPALLSPPPHTAWRTNRRVATTMP
NKRKPTMDHSIQQPPLKKVVNDGPMSSLATDMQIDGFPGMESKGGTSSLPAHLVNHNLPG
GSRLEKKKDGRAPKVTAVLTQAWKEDMDAGHLLASLFELFGESILSFTPSAEMSFFL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgtgcctaaggaaacgattgaggtcattgcacagagcattggtattagtaac
ctttctcctgatgtcgcacttgctcttgctcccgatgtggagtatcgtgttcgggagatc
atgcaggaggcgatcaagtgcatgcgccactcgaagagaacggttttgacggctgatgac
gtggatagtgcccttaagttaagaaatgtggagccaatgtatggctttgcctccggagat
cctctgcgctttaaaagggctgttggacataaaaatttgttctacattgatgacaaggat
gttgagttcaaaaatgtgattgatgctcctttaccaaaagctccgcttgatacagctgtc
cttgctcattggctagctattgaaggagtgcaaccagcaattccggaaaatgctcctgta
gaagcacttgttgcaccttcggacacaaaaaagtctgaacacaaagatgatggacttcct
gccgatattaaattgcctgttaagcatatattatctagggagcttcagctatattttgat
aaaatcactgagctaactgtcagtaaatctaactccattctctttaaagaagcattagta
agcctggctacagattcaggacttcatcctttagttccttatttcacatattttattgct
gatgaggtcacgaagagtttgagtaatgacttccctcttcttttcgctttgatgcgcgtt
gttctgagtcttctccagaatccacacatacacatagaaccttatctgcaccagctaatg
ccatctgtgattacctgccttgtggccaaaagattgggaaataggttttctgacaatcac
tgggagcttcgggatttcgctgcaaatatagttgcttcagtatgcaagagatttgggcat
gtttatcacaatctacaaccgcgggtaacgagaactctgcttcatgcttttctggatcca
acgaaagcaatgacccaacattatggtgctattcaagggcttgctgctctgggacccagc
gtggtacgtcttttaatacttcccaatctggagccttatttaaaactactggagccagag
atgcttcttgaaaagcaaaagaacgagatgaagaggcatgaagcttggcgtgtgtatggg
gctctgctgtgtgctgcaggtcagtgcatgtatgaacgcctgaaattgttcccagctctg
ctatccccgcctccacatacagcctggaggactaatcgaagagttgcaactacaatgcca
aataaacgcaaaccaaccatggaccactcgattcaacagccacctctcaagaaagttgta
aatgatggtccaatgagttcactggcaactgacatgcaaatagatggatttcctgggatg
gagtccaagggtgggacatcatcattacctgcacatcttgtgaaccataacttacctggt
ggcagcagattagaaaagaagaaggatggtcgtgctccaaaagtaacagctgttctcacc
caggcctggaaggaggacatggacgccggccatctgttagcatcattgtttgagttgttt
ggtgaaagcattttatccttcactccctcagctgagatgtctttcttcttgtga
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