Papaver somniferum (opium poppy): 113348663
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Entry
113348663 CDS
T05758
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K14485
transport inhibitor response 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
113348663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113348663
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113348663
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_4
F-box_5
LRR_At5g56370
LRR_6
LRR_At1g61320_AtMIF1
LRR_8
F-box
F-box-like
Homeodomain
Motif
Other DBs
NCBI-GeneID:
113348663
NCBI-ProteinID:
XP_026448295
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Position
2:complement(104880187..104883780)
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AA seq
600 aa
AA seq
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MASKKRKESPEEEEWEEEEGVKRICSSKDTSFPDEFLKRILDFVQCHKDRNSVSFVCKGW
YETERISRTSLFIGNCYSISPERVVKRFPNIRSVTLKGKPRFSDFNLVPPNWGSDLHSWL
VAFASAYHCLEQLKLKRMTVADESLEFLAHSFLKFKAISLVSCDGFSTEGIASIATYCRN
LTELDIQENSIDDLGGSWLSCFPDNYTSLEVLNFANLQSEVSFDALEKLVTRCKSLKALK
VNRNITLEQLQRLLVLAPQLKELGTGTFSEELTPDQLTELENAFNNCKNLETLSGLWEAS
SLFLPVLYAACSNLTFLNLSYAPLESEELAKFLEHCPNLRRLWVLDTVEDKGLEAVASNC
PLLEELRVFPADPSDPDVVLGENIGVTDAGFIAVSRGCPKLHYVLYFCRQMTNAAVATVV
QNCPDFTHFRLCILKPCQPDYTTNEPMDEAFGSVVKRCTKLTRLSVSGLLTDLAFEYIGK
YAKNLEFLSLAFVGSSDKSMQCLMSGCPKMRKLEIRDCPFGDAALLSGLDRYESMRSLWM
SGCNLTIDGCRKLAKEKPKLNVEVIKEEESEDDVQAEKVYIYRTVVGPRKDAPPFVLTLE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaagaagagaaaggaatcacctgaggaggaagagtgggaagaagaagagggt
gtaaagcgtatttgttcttctaaggatactagttttcctgatgagttcttgaaacgaata
ctagatttcgtacagtgtcacaaggatagaaactcagtttcttttgtgtgtaaaggttgg
tatgaaactgaaaggataagtagaacaagtttgtttattgggaattgttactctatttca
ccagagagagttgtcaagagatttccaaatatacgaagtgttacacttaaagggaaaccc
agattctcagattttaatctggttccacctaattggggatctgatcttcattcatggttg
gttgcttttgcttcagcttatcattgtttggaacaacttaagcttaagagaatgactgtg
gctgatgaaagcttggagtttttagctcattcttttcttaaatttaaagctatatctctt
gttagctgtgatgggtttagtactgaaggaatcgcatccattgctacttattgcagaaac
ttgacagagctggatatacaagagaacagcatagatgatctaggggggagctggttgagt
tgctttcctgacaattacacatcattggaagttctcaacttcgctaatcttcagagtgaa
gtcagctttgatgctttggagaagcttgtaaccaggtgcaagtcattgaaggctttaaaa
gtgaatagaaatattacattagagcagttgcagcgtttgctcgtccttgctcctcaactg
aaggagctcgggactggtaccttctctgaagagcttacccctgaccaacttacagaactt
gaaaatgcgtttaacaactgcaagaatttagagacactatcgggtttgtgggaagccagt
tcactcttcctcccggtattatacgcagcctgcagcaacctaactttcttaaatttaagc
tatgctcccctggagagtgaagagctggctaagtttcttgaacattgtccaaatctacga
cgcctctgggtgttagacacagtagaagacaaaggcctagaagccgttgcttccaactgt
ccactgcttgaggagctccgtgtattccctgcagacccctctgatccagacgttgtactt
ggggaaaatattggtgtgacagatgctggtttcattgctgtatcccgtggctgtccaaaa
cttcactatgttttatacttctgccggcagatgacaaatgctgccgtggctactgtggtt
cagaactgccccgattttacccacttccgtctctgcatcttgaagccttgccagcctgac
tacacaactaatgaaccaatggatgaagcttttggttcagtagtcaagagatgtaccaag
ctcacaaggctgtctgtctcaggcttacttacggatttggcatttgagtacatagggaag
tatgcgaaaaacttggaattcctatcattggcatttgtgggcagctctgacaaatcaatg
cagtgtttgatgagtggatgtcctaagatgcggaagcttgagataagggattgccctttc
ggagatgcagcacttctgtcagggctagatcggtatgaatcaatgcggtcactctggatg
tcaggatgcaatttaacaatagatgggtgtcgaaaactggccaaggaaaagccaaaacta
aatgtagaggtgatcaaggaggaagaaagtgaagacgatgtacaagctgagaaggtttac
atttatcgtacagttgttggacccagaaaagatgcgccgccttttgttctcactcttgag
taa
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