Papaver somniferum (opium poppy): 113348792
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Entry
113348792 CDS
T05758
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113348792
04121 Ubiquitin system [BR:
psom04121
]
113348792
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
Other 90S particles
113348792
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113348792
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
PROPPIN
VID27
Motif
Other DBs
NCBI-GeneID:
113348792
NCBI-ProteinID:
XP_026448447
LinkDB
All DBs
Position
2:110591009..110596491
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKCISRAEEDFTRERSQDLQRVFHNFNPVLRPLERAVEYQRAVNAVKLDKIFARPFIG
AMDGHIDAVSCMAKNPNHLKGIFSGSMDGDIRLWDLASRRTICQFPGHQGAVQGLSASTD
GRVLVSCGTDCTVRLWNVPDSSVMNMDELSDGTTEPLAVYVWKNAFWAVDHQWDGDQFAT
AGAQVDIWDHNRSEPIRSFEWGKDTVISLRFNPGEPNILATSSSDRSITLYDLRLSTPVR
KLIMKTKTNALCWNPMEPMNFTAANEDCNCYSYDARKLEEAKNVHKDHVSAVMDIDYSPT
GREFVTGSYDRTIRIFPYNGGHGREIYHTKRMQRVFCVKFTCDATYVVSGSDDTNLRLWK
AKASEQLGVIVSRERKKHEYNEALKKRYGNLPEIKRINRHRHLPKAIHKARSLRLTITNA
AKKKDDRRRAHSAPGSMPIQSQRKKRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcaagtgcatatctcgtgctgaagaggattttactcgcgaacgcagtcaggat
cttcagcgagttttccataacttcaatccggttttgagaccactagaaagagctgttgaa
tatcaacgggctgtaaatgctgtcaaattggacaagatatttgccagacctttcattgga
gctatggatgggcatatcgacgctgtctcatgtatggcaaagaaccctaatcacctaaaa
ggaattttttcgggctccatggatggagatattcgcctttgggatcttgcctccagacgg
acaatttgccagttccctggacatcagggtgctgtccagggtttgtcagcttctactgat
ggacgtgttcttgtatcttgtggaactgattgcacggtgaggctttggaatgttccagac
tcaagtgttatgaatatggatgaattatccgatggtactactgagccgctggccgtttat
gtatggaagaatgctttctgggcggttgatcaccagtgggatggtgatcaatttgcaaca
gctggtgctcaagttgatatatgggatcacaataggtcagagccaataaggagtttcgag
tgggggaaggatactgttatatctcttcgatttaatcctggtgaaccaaatattttagcc
acatctagcagtgatcgcagcattaccttatatgacttgcggttgtcaactccagtgagg
aagctgatcatgaagacaaagactaatgctctctgctggaacccaatggagccgatgaac
ttcacagctgcaaatgaggattgcaattgctacagttatgatgctagaaaactggaggag
gccaagaatgtgcacaaggatcatgtttccgcagtgatggacattgattactcacctact
ggtcgggagtttgttactggctcttatgatagaactataagaatcttcccatataatggt
ggccatggccgggaaatctaccacactaagaggatgcaaagggtattttgtgtgaaattc
acctgcgacgccacttatgtcgtttctgggagtgatgatactaatctgcggttatggaaa
gctaaagcatcagaacaattgggagtgatcgtatctagggagcgtaaaaagcacgaatat
aatgaggctctgaagaaaagatacggaaaccttcctgagattaagcgcattaataggcat
agacacttgcctaaagcaatacacaaggcacgcagtctaaggctcacaataactaatgca
gctaagaagaaagatgataggagaagagctcacagtgccccaggaagtatgccaatacag
tcacagcgcaaaaagagaatcatcaaagaagttgagtaa
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