Papaver somniferum (opium poppy): 113349172
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Entry
113349172 CDS
T05758
Name
(RefSeq) nuclear pore complex protein NUP85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113349172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113349172
03036 Chromosome and associated proteins [BR:
psom03036
]
113349172
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113349172
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113349172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
113349172
NCBI-ProteinID:
XP_026448889
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All DBs
Position
2:complement(133884862..133890864)
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AA seq
705 aa
AA seq
DB search
MPGRLSSSGDSVVPFSSEVRDPVVYHIQHGVKPPISRLSIAWSRGNCLRVSFFRPELDEE
EVGGKVVEVKLSSGDEEFDDSQKRKIAYGSVSPFAVFQNQKNSILAMSKMAYHIDWSHQV
MEYSRDVKSLLGYPSTTPSSVIDDPRTVLKTGEKPTCLKAAWELLEIFYADKQSHAWLPE
CLVDWLADYDSLLSASEVTVHSKLVDLQNQLVNFQAVEDDRNYWEGVSSALSVGWFDTAV
KLLRLHGSYQVDQLGNRETENGLVEAVAVLISKMPRMRPELSKRGLGECFKTKPDFMKAW
EKWRGHISKLECSAFWIQCDHQQTRDGLRNLLQIMLGNTNSLEAATCNWMELYVSNFLYI
RPFTMGLEGMYTLAQKCMQLRPMSNTHRLMGLIFGILGENIEVVLAECSREFGLWMVAHA
IELLTAGSNQAEMLLHEERHNLGGISIEELHRLVYAQVLASHALTWQIAPVYLMSCMKQG
IALLEILLYKQPVQHNRMLLKSLEICRMYQLDSISTNLMKIAGIYHWKHGRKGFGVFWLQ
QAGDELRLSRIAQQLFDYVGKSISDDSFKQWEGMIELLSSEAMSAGGLEFLHKYRDLKKS
LQKVRDGIATDTAKQAVESLILLMKSPSTPQRFWLSLMHDSLKLLNWRERPLLNVSQTNL
LLNKLQELSMARLRPDFCETDLPPQTLGTIRLALATNLGRAILEE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccgggacgtctgtcgagttccggcgacagcgtcgttccgttttcatcagaagtgaga
gatccagtagtataccatattcaacatggagtaaaacccccaatttctcgtctatcaatt
gcttggtctcgtggaaattgccttcgcgtatcgtttttcagaccggaattagatgaagaa
gaagttggtggtaaagttgtggaagtgaaattaagtagtggagatgaggaatttgatgat
tctcagaaaagaaaaattgcttatggatctgtttctccatttgctgtttttcaaaatcag
aagaactcgattctagcaatgtctaaaatggcttatcatatagactggtcgcaccaagtt
atggaatatagcagagatgtaaaatctcttctaggttatcccagtacaactccaagttca
gtcatagatgacccaagaacagttttgaagactggtgagaagccaacctgtttgaaagct
gcgtgggagcttttagaaatcttttatgcagacaagcagtctcatgcatggcttccagaa
tgccttgtcgattggttagcagattatgacagcctcttgtccgcatcagaggttactgtt
cattcaaagcttgtggatcttcaaaatcaattagttaattttcaggcagttgaggacgat
cgtaattactgggaaggagtatcttcagcactttcagtaggttggtttgatactgcggtg
aaactgttgagattgcatggctcatatcaggttgatcagcttggaaatcgtgagacagaa
aacggtctggtggaagctgttgctgtccttatctccaaaatgccacgtatgcgacctgag
ctatcaaagagaggattgggtgaatgctttaaaacaaagcccgactttatgaaggcatgg
gagaaatggcgaggtcatatatctaaactggaatgcagtgcattctggattcaatgtgat
caccaacagaccagggatggattaaggaatctcttgcagatcatgttgggaaacactaac
agtctcgaagcagcaacatgtaactggatggagctctatgtatctaacttcctctacatc
aggccattcacaatgggtttggaaggaatgtacaccttagcacaaaaatgcatgcagttg
agaccaatgtctaacactcacaggctgatggggctcatctttggaattctcggggagaat
attgaggttgttttagccgaatgctctagagaatttggcctctggatggttgcccatgct
atagagttgttgaccgctggaagcaatcaggcagaaatgctcttacatgaagagcgtcat
aacttgggaggaatcagcatagaggagctacatcgacttgtctatgctcaagtgctagct
tctcatgctttaacttggcaaattgctccagtctatttgatgtcatgcatgaagcaagga
atagcattgctggagattttattgtacaagcaacctgtacaacataaccgaatgctcctt
aagagtctagagatttgtcgcatgtatcaacttgacagtatcagtacaaatcttatgaag
atagcgggaatataccattggaaacatggtagaaaaggatttggagtcttttggctacaa
caagctggggacgagctgcgcctcagtagaatagcacaacagttatttgattatgtcggc
aagtcaatttcagatgatagtttcaagcaatgggaaggaatgattgaattgttgagttcg
gaagctatgagtgcagggggtcttgagtttcttcacaagtatagagatctcaagaaatcc
cttcagaaagttcgagatggaattgctactgatacagctaaacaagctgtggaatcgctt
atactgctgatgaaaagtccttccacgccccaacgtttctggctgtcacttatgcatgat
tcgttaaagttgctaaattggcgggaacgacctctgctgaatgtatcacaaaccaatctt
ttgttgaacaaacttcaagagttatctatggcaaggctgcgtccagacttttgtgagacc
gatttaccacctcagaccctaggcaccatcagactcgctttggccacaaatcttggacgt
gcaattttggaggagtga
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