Papaver somniferum (opium poppy): 113349219
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Entry
113349219 CDS
T05758
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113349219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113349219
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113349219
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_9
FAN1_TPR
PrmA
Motif
Other DBs
NCBI-GeneID:
113349219
NCBI-ProteinID:
XP_026448935
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All DBs
Position
2:136781768..136791944
Genome browser
AA seq
866 aa
AA seq
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MASEPDMSSWTDLLHSSTKLLEQAAPSAQFPALQRNLDQLEALSKKLKSKTVRTEVPAES
NAATRLLAREGINAEQLARDLKSFELKTKFEDVFPAEATSVEEYLQQVHEMAMVTAIQEA
QKDNVRSFNDYMVKVLEEDWQKEKWDFLQGLSRLSTLPRASGSVGTVINRPGEMASITSS
PRVSTGTTGMELVPSANNKPTLEMKASVYAEVVRKLNDARERALPFKPATAFRGAYETLG
LDVSGGKSVTMQKIWHLIQALVGEDSSVKHNVSRKMSLVIGARRHLERGHEKYILDTIQS
HPAQAALGGVVGNLQKIRAFLRIRLREYGILDFDASDARRQPPVDTTWQQIYFCLRTGYY
DEARNVALSSRASHQFAAQLAEWISTGGMVSQETAAAATEECEKMLRMGDRIGRPAYDKK
KLLLYAIISGSRKQIDWLLRDLPTIFNTIEDFLWFKLSAVRDRPGGGASSSSAILNEGMV
PYSLDDLQVYLNKFEPSYYTKNGKDPLVYPYILLLSIQFLPAVLYLSKETGDGGFNIDAV
HISIVLADHGVLSDGAGTGPKLGLMDAFAEAASMIRQYGSAYLHSDNLSAALEYYAQAAS
AMGGGELSWTGGGNSNQQRQRQLMLKQLLIELLLRDGGISLLLGARGAGEEGQLRRFLND
RTAQQQFLLEAARQCQEAGLYDKSVEIQKRIGAYSVALETINKCLSESICALSRGRFDGD
SQTSGLIQKANEILEAYKYSHESSLHDREHILEQQTVLRQLEAILFIHKLAKSGQYADAL
RELMKLSFLPLDPRSQDISVDVFPKLALHVQACVPDLLKVALSCLDNVADSDGLLRALRI
KIANFVANNMARNWPRDLYEKVARTI
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaccagacatgagtagttggactgatcttcttcattcttctactaaactt
ctcgaacaagctgctccatctgcccagtttcctgccttacagagaaacttagatcaatta
gaagcgttatcaaagaagcttaaatctaaaactgtacgaactgaagttcctgcagaatct
aatgcagccaccaggctgttagcgcgtgaagggataaatgccgaacaacttgcgcgggat
ctcaagtcttttgagttaaagacgaaatttgaggatgtcttccccgctgaggcaacaagt
gttgaagagtatttgcagcaggttcatgaaatggccatggtcacagctattcaggaggct
cagaaggataacgttagaagctttaatgattacatggtgaaagttttggaggaggattgg
caaaaggaaaagtgggattttcttcaaggtttgagtcggctttctacacttcccagagca
agcggtagtgtaggcacagtgattaatcgtcctggtgaaatggcttccattacttctagt
ccaagggtttctactggtacaacaggcatggagctcgtgccttcagcaaataataagcct
accctcgaaatgaaggcttcagtgtatgctgaggttgttaggaaactaaatgacgcaaga
gaacgagccctaccatttaaacctgctactgctttcagaggtgcttatgaaactttagga
ctcgatgtttctggtggaaaatcagttactatgcagaagatctggcacttaattcaggca
ttagttggtgaagactcgtctgttaaacacaatgtatcaaggaaaatgtcattagtaatt
ggtgcaagacgacacctggaaaggggtcatgagaagtatatccttgatacaatccaaagt
caccctgcacaggctgctcttggtggggttgtggggaacctgcagaaaattcgtgccttt
ctccggatccgtttgagggagtatgggattctagattttgatgcaagcgatgcacgcagg
cagcctcccgttgatacgacttggcaacagatttatttttgcttgcgaactggttattat
gatgaggctagaaatgttgctttgtcatctcgtgcttcacatcaatttgctgctcagctt
gctgagtggatttctactggaggtatggtgtcccaagagactgcagctgctgctacagaa
gaatgtgagaaaatgttgaggatgggggatcgaattggtcgacctgcgtatgacaagaaa
aagttactactttatgctatcatatctggttcacgcaaacagattgactggttgcttagg
gatctaccaacaattttcaatactatcgaggattttttgtggttcaaattgtcagcagtt
cgagatcgcccaggtggtggagcttcttcctcctctgctattttgaatgagggcatggta
ccttacagtttagacgatctgcaggtttaccttaataagtttgagccttcgtattacaca
aagaacgggaaggatccgttagtgtacccttacatattacttttgagcatccagtttttg
ccagcggttttatacttatccaaggaaactggagatggaggattcaatatcgacgcagtt
catatttcaattgttctagcagatcatggggttctttcggatggtgctggaactggtcca
aagctgggtctaatggatgcttttgctgaagctgctagcatgattcgccagtatggttcg
gcatatttgcattcagataatctctcagcggcactagaatattatgcacaagctgcttct
gcaatgggtggtggagagttatcttggactggaggaggaaacagcaatcagcaaagacag
agacaattgatgctcaagcaactccttattgagctattattacgtgatggtggcatatct
cttttgcttggtgcaagaggtgctggcgaggaaggtcaacttaggaggtttctaaatgac
agaacagcacaacaacagtttttgcttgaagctgctcgccaatgccaggaagctgggcta
tacgacaaatctgtagaaatacaaaagagaattggggcctattcagtagcactggagaca
ataaataagtgcctctcagaatccatttgtgctctctcgcgtggtagatttgacggggac
agtcagacttctggtctcattcaaaaagcgaatgagatattggaagcttacaaatactca
catgaatcaagcctgcatgatagagagcatattttggagcagcaaacagtgttaagacag
cttgaggcgatattgtttatccataaactagctaaatcaggtcaatatgcagatgcttta
agggagctaatgaagctgtcattccttcccttagatccgcggtcacaagatatctcagtt
gatgtgtttcccaagttagcattgcatgtccaagcttgtgtgccagatctcctgaaggtt
gctcttagctgtctagacaatgtagcagattcagatggactactgcgcgccttacggatt
aagattgccaattttgttgcaaacaatatggcgaggaactggccccgcgatttgtacgaa
aaggttgcacgaaccatttga
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