Papaver somniferum (opium poppy): 113349683
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Entry
113349683 CDS
T05758
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113349683
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113349683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
TPR_2
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
TPR_19
ANAPC3
TPR_17
Beta-prop_IFT140_1st
ChAPs
TPR_14
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
113349683
NCBI-ProteinID:
XP_026449485
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All DBs
Position
2:166232960..166240791
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AA seq
759 aa
AA seq
DB search
MSRAPSTLMTNFSDGNIIDFIDSKNVEIRNDINHRLQMHSSLVRRLSFERELEGHQGCVN
SVAWNSSGSLLISGSDDALINIWSYSSRKLLHSIESGHSANIFCAKFVPETCDELVVSGA
GDAEVRQFNLSLLTTGKPGENAIEPSASFHCHSRRVKKLAVEVGNPNVVWSASEDGTLRQ
HDFREGTSCPPNGSSHQECRSVLLDMRSGAKKSLADPPKQCLSLKSCDISTTRPHLLLVG
GSDAFARLYDRRMLPPLSSCQTMTKPPPCIGYFCPMHLSDRRTPSLHLTHVTFSPTGEEI
LLSYSGEHVYLMDVNTGGDIVTKYSVDDVSEQYKLVPTTSRTTTEAPAPQVFGKDIRRRR
RNSSDMLSKCKELVEIAEASLRESKNYYGIEACNEVLDGNASVIGPKLRHECLCTRAALL
LKRKWKNDTHMAVRDCNKARSIDPSSFKAHFYMSEALLQLGKHKEALEYAIAAQLLAPSN
TEVAERVISIKEHLAAAEAEKSNTNVGQSQSEARPGRMQTAIDVLNSDAPVDDVRSREDS
DYEAEVELDFETSVSGDEADSAHSGPHINFRFRRRSDSARESSCTNGSCGSTSSSSSQND
NTSYQPETVVDMKQRYVGHCNVGTDIKQASFLGQRGEYVASGSDDGRWFIWEKRTGRLVK
MLSGDEAVVNCVQCHPFDCTIATSGIDNTIKIWTPEAPVPSIVAGVSVGPEMADVLSAME
TNQNKLSRNRNVLPFELLERFRMHEFAEGTLHPFECAQT
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagctccatcaacactgatgacaaatttctcagatggaaatatcattgatttt
attgatagtaaaaacgttgaaattcgtaatgatattaatcaccggttgcaaatgcactcc
tctttggtacgaaggctttcctttgagagggagttggagggtcatcagggttgtgttaac
agtgtggcatggaactcaagcggatcactccttatatctggatcagatgatgcgctaatt
aatatttggagttattcaagcaggaagcttttgcatagtatagagagtggacattctgca
aacatattctgcgcaaaatttgttcctgagacttgtgatgaacttgtggtgtctggagca
ggagatgcagaggtccgccaatttaacttatctctcttaactacgggaaaacctggagag
aacgcaatagaaccttcagcgtcctttcattgccactcaaggagagtgaagaagctagct
gtggaagttgggaatcctaatgttgtatggagtgcgagtgaagatggaactttgcggcag
catgacttcagggagggtacttcttgtcctccaaatggatcatctcaccaagagtgtcgt
agtgttctgcttgatatgcgttctggagcgaaaaaatcactagctgatcctcctaaacaa
tgtttgtccttaaaatcttgtgacatcagtaccactcgcccacatttactccttgttggt
ggcagtgatgcttttgctcgtttatatgatagaaggatgcttccaccacttagttcctgt
cagactatgacgaagcccccgccgtgcattggttacttctgtccgatgcatctttctgat
cgtcgaactccaagtttacacctgactcatgttacttttagcccaactggagaagaaatt
cttcttagctatagtggcgagcatgtttacctgatggatgtgaacactgggggcgacatt
gtcacgaagtattccgtggatgatgtttcagagcaatataagctggtccctacaaccagt
agaaccacgaccgaagcgccggcaccacaagtctttgggaaggatatacgacgaagaaga
aggaattcctctgatatgcttagcaaatgcaaggagttagttgaaattgctgaagcatcc
ttaagagaatcaaaaaactattatggtattgaagcatgcaatgaagtactggatgggaat
gcttctgttatcgggccaaagctgaggcatgagtgcttatgtactcgggcagcattgctc
cttaagaggaagtggaaaaatgatacccatatggcggtaagagattgcaacaaagctcga
agcattgatccttcgtcatttaaggcacacttctatatgtcggaagctcttttgcagtta
gggaaacataaggaggctctggagtacgctatagctgcacagcttttggctccatcaaat
acggaagtggcagagagagtgatcagtattaaagaacatcttgccgcagctgaagctgaa
aagagtaacactaacgttgggcaatcacagtctgaagctcgaccaggaagaatgcagaca
gcgattgacgtactgaacagtgatgcaccagtagatgatgtaagatccagagaggattct
gactatgaagcagaagttgaactagattttgaaacgtcagtgtcaggtgatgaagcagat
tctgcacattctggtcctcatataaattttagatttcgccggagaagcgactcagctaga
gaaagtagctgtacaaatggctcctgcggatccacctcatcctcatcgtctcaaaatgat
aacacatcttatcagcctgaaacagttgttgatatgaaacaaagatacgttggacattgc
aacgtagggacggacattaagcaggccagttttcttggtcaaagaggggaatatgtcgct
agcggaagtgatgatgggaggtggtttatttgggagaagcgaacaggaagactggtaaaa
atgctttctggggatgaagcagttgtgaattgtgtacagtgtcatccatttgattgtacc
attgctaccagcgggatcgacaacacaatcaagatatggacgccggaagcgccagtacca
tccattgtggcaggagtatcggtaggacctgagatggcagatgtgctaagtgccatggag
accaatcaaaataagttgtcacgtaaccgtaatgtcctgccctttgagcttctggagcgt
tttaggatgcacgaatttgctgagggaacattgcacccatttgaatgtgctcaaacataa
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