Papaver somniferum (opium poppy): 113349741
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Entry
113349741 CDS
T05758
Name
(RefSeq) nuclear pore complex protein NUP58-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113349741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113349741
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113349741
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP58_M
DUF2491
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
113349741
NCBI-ProteinID:
XP_026449555
LinkDB
All DBs
Position
2:168980758..168985016
Genome browser
AA seq
470 aa
AA seq
DB search
MSFSGFSTQPQQNLFQPQSQPNSFQQTNLFQQTQQQQQQPQQFQFQQQQQQQQQQLYLLT
NDKTPATYNTKWADLHPDSQKTLLQIEERILEFRDESQRLDQCSRLYDSSVSNDGFELDA
SHIVQELGGISTGMEREKIVLQELMVVIKNIMRNTELAVRSFMILRPRFIHPKVGAAANI
NAQGQAQGAPSAITPSVSTSSVPEYDFYSGLPRRPSPFMQQTVARLEKYLGECRQCVEEL
EQLLLSDSERSSGSDSSLLQSLPKVLSNVHDFFVHVAAKVESLHQGIESMKSAYLADQRR
RGDSNDPFLEADRRQLAKQEAASKRVHPTLHLPAVSQPSTQVAGLFAGSAAPAINAPQPS
LGTTPASSGSGFSLFTSPAAAPSANLFSTPASAPTSSLFGSPAASPQPPILGTLQPSLFG
PTPAQSFGSSPATGTSPFSSTPFASGQPAGSGSSFGNVSKSRPKSRTARR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttcaggattctctactcaacctcaacaaaacctttttcaaccccaatctcaa
cctaattcctttcaacaaactaacctctttcaacaaacccaacagcaacagcagcaaccg
caacagtttcaatttcagcagcagcaacaacagcaacagcaacaattatatctcctaaca
aacgataaaactccagcaacttataataccaaatgggctgatcttcatcctgattctcag
aaaacccttctccagatcgaagagagaatattggagttcagggatgaaagccaacgactt
gatcaatgtagccgtctttacgattcctcggtctccaatgatggattcgagctcgatgct
agtcatattgtgcaggaacttgggggaatcagcactggcatggaaagagagaaaattgtg
ctgcaagaactgatggttgtcataaaaaacataatgagaaacacagaacttgcagtgcgt
tcattcatgatactccgccctaggtttattcatccaaaggtgggagctgccgcaaatatt
aacgcccaaggtcaagctcaaggagctccaagtgcgattactccatcagtatctacctct
agtgtacctgaatatgatttctacagtgggctgccaagaagaccatcacctttcatgcag
caaacagtagccagattagagaaatatcttggtgagtgccgccagtgtgttgaagagtta
gagcaactgctcctctctgattctgagagatcttctggttcagattcatcattgttgcag
tctttaccaaaggttttgtccaatgtgcacgatttctttgttcatgtagctgccaaggtg
gagagtcttcatcaaggcattgaatccatgaagtcagcttatcttgctgaccaacgacga
cgaggggatagtaatgatccatttcttgaggcagatcggaggcaactggccaaacaagaa
gctgcttctaagagagttcatccaacattacatttgcccgccgtttcacaaccatctact
caggtagcaggtttgtttgctggttcagcagcaccggctataaatgcaccacaaccatca
ttagggaccacgccagcttcttcagggagtgggttctctcttttcacatccccagctgct
gctccatcggccaacttattttctaccccagcatctgctccaacgtcgtcccttttcggt
tcacctgctgcttctcctcaacctccaattttagggacactgcaaccatctttgtttggt
ccaaccccagctcaatcttttggttctagccctgccactgggacttcacctttctcttct
actcctttcgcatcaggtcaaccagcaggatctgggtcaagctttgggaatgtttctaag
tctcggccaaaatccaggactgcaagacgctag
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