Papaver somniferum (opium poppy): 113349901
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Entry
113349901 CDS
T05758
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
psom04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113349901
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113349901
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113349901
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113349901
03036 Chromosome and associated proteins [BR:
psom03036
]
113349901
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113349901
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113349901
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113349901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_1
EF-hand_6
P2R3B_EF-hand
EF-hand_5
EF-hand_8
DUF4187
Motif
Other DBs
NCBI-GeneID:
113349901
NCBI-ProteinID:
XP_026449720
LinkDB
All DBs
Position
2:complement(179320908..179326962)
Genome browser
AA seq
542 aa
AA seq
DB search
MDMDEVRGDVASLDIDLLQLPELSPIALKSNPHIAEELFSKWLSLPETNRLVKSLLDDAK
AGSPLNVAGSSSSSTAGSGNLLPSMFPAGSAPPLSPRSSSGSPRFMKRQGVGPSSLGSPL
KLVKEPVREVIPQFYFQNGRPPPNELKQQCLARINQNFAGHLDTGLQVHEFKLVTKDICK
LPSFFSSSLFKKIDGNCTGVVTRDAFVDCWINGNMLTMDIATQIFTVLKQPDRRYLTQED
FKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFFYVNRAWNGRLTLRELKRSNLIT
AMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDMDHDFLIDKENLIRYGNHALTYRIVD
RIFSQVPRRFTCKVEGKMGYEDFVYFMLSEEDKSSAPSLEYWFKCIDLDGNGVLTSNEMQ
FFYEEQLHRMECMAQEPVLFEDILCQMVDMVGPENECHITLRDLKGSKLSGNVFNILFNL
NKFMAFETRDPFLIRQEREEPTLTEWDRFAHREYIRLSMEEDGEDASNGSAEVWDESLEA
PF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggatatggatgaagtaaggggggatgtagcatccctagatattgatttattgcagtta
cctgagttgtctccaatagcacttaaatcaaatcctcacattgctgaagagttgttctca
aagtggctttcactacctgaaaccaatcgactggtgaaatctttgcttgacgatgctaaa
gcggggtctcccctcaatgtggcagggagttctagtagctctactgctggttcgggcaat
ttactgccttcaatgtttccagcaggcagtgcacctcccctttcacctagaagttcatct
ggttctccgcgttttatgaaacgccaaggcgttggtccctcttctttaggttctccttta
aaattagtgaaggagccagtaagagaagtcataccccagttctactttcaaaatggtcgc
ccgccaccaaatgaactgaaacagcaatgcttggccagaattaatcagaattttgctggg
cacttagacactgggcttcaagttcatgaatttaaattagtgacaaaggacatctgcaag
ttgccatcatttttttctagctctcttttcaaaaagattgatgggaactgtactggtgtt
gtcacaagggatgcatttgttgattgctggatcaatggcaacatgttgactatggatata
gcaacccaaatatttacagttctgaagcaaccggatcgtagatacctcactcaggaagac
ttcaaacctgttttacgagaacttttggctactcatcctggtttagagtttttacaaagc
acgccagagtttcaggaaagatatgcggaaactgtcatatacagaatatttttctatgtg
aatagagcatggaatggccgtcttaccttgcgggagctgaaacgtagcaatctaattact
gcaatgcaacatgctgacgaggaagaggatatcaacaaggttttgagatacttctcatat
gaacacttctatgttatatactgcaagttttgggagcttgacatggaccatgatttcttg
atcgataaagagaaccttatcagatatggtaaccacgcccttacatatcgaatcgtggac
aggattttctctcaggtccctagaagatttacttgcaaggttgaggggaagatgggatac
gaagattttgtttatttcatgctatcggaggaggataaatcatctgcacccagtctagag
tattggttcaagtgtatagatttggatggaaatggtgtcctaacatccaacgaaatgcag
tttttttatgaggagcagttgcatcgcatggagtgtatggcccaggagcctgtgctcttt
gaggatattttgtgccagatggttgatatggttggaccagagaatgaatgccatattacg
ctgcgtgatttgaagggttccaaactgtcaggaaatgtattcaacatccttttcaatctt
aacaagtttatggcttttgaaacacgtgacccgtttttgattcgtcaggaacgtgaagaa
ccaactttgacagagtgggatcgctttgcacatagagaatatattaggctttcaatggaa
gaagatggtgaagacgcctctaacggaagcgcagaagtttgggacgaatcacttgaggct
ccattttga
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