Papaver somniferum (opium poppy): 113349903
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Entry
113349903 CDS
T05758
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113349903
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113349903
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113349903
03036 Chromosome and associated proteins [BR:
psom03036
]
113349903
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113349903
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113349903
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113349903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
113349903
NCBI-ProteinID:
XP_026449721
LinkDB
All DBs
Position
2:complement(179413640..179419763)
Genome browser
AA seq
542 aa
AA seq
DB search
MDMEVVVGDVASLDIELLQLPELSPIALKSNPHIVAELFSQWLSLPDTTRLVKSLLDDAK
AGSPLNVSGSSCSSTAGSNNSLPSMFPAGSAPPLSPRSSSGSPRITKRLGVGPSSLGSPL
RLVKQPVREVIPQFYFQNGRPPPNDLKQQCLARINQIFSGHLDTGLQVHDFKSVTKDICK
LPSFFSSSLFKKIDVNCTGVVTRDAFVDYWVNGNMLSMDIASQIFTVLKQPDRKYLTQED
FKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFFYVNRAWNGRLTLRELKRGNLIT
AMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDQDHDFLIDKENLIRYGNHALTYRIVD
RIFSQIPRKFTCKVEGKMGYEDFVYFMLSEEDKSSAPSLEYWFKCIDLDGNGVLTSNEMQ
FFYEEQLHRMECMAQEPVLFEDILCQMVDMIGPENECHITLHDLKGSRLSGNVFNILFNL
NKFMAFETRDPFLIRQEREEPTLTEWDRFAHREYIRLSMEEDGEDASNGSAEVWDESLEA
PF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaagtagtagtaggggatgtggcgtccttagatattgaattgttacagtta
cctgagttatctccgatagctcttaaatcaaaccctcacattgttgccgagttgttctca
cagtggctttcacttcctgatactactcgtctggtaaaatctttgctcgatgatgctaaa
gcaggctctccactcaatgtgtcagggagttcttgtagttcaaccgctggctcgaacaat
tcattgccttccatgtttccagcaggcagtgctccaccactttcacctaggagttcatct
ggttcaccgcgcatcacaaagcgcctaggggttggcccatcttctttaggttctccccta
agattagtcaagcagccagttagagaagtcataccccagttctactttcaaaatggccgc
ccacccccaaatgatctgaaacagcaatgcttggctagaattaatcagattttttctggg
cacttagatactgggctgcaagttcatgattttaaatcagttacaaaggacatttgcaag
ttaccatcatttttttctagctctcttttcaaaaagattgatgtgaactgcactggggtg
gtgacaagggatgcatttgttgattactgggtcaatggcaacatgttgagcatggatata
gcatcccagatatttacggttttgaagcaaccagaccgcaagtacctcactcaggaagac
ttcaaacctgttctacgagaacttttggcaactcatcctggtttggagttcttacaaagc
acaccggagtttcaagaaagatatgcggaaaccgtcatatacagaatatttttctatgtg
aatagagcatggaatggtcgtcttactctgcgggaattgaaacgtggcaatctaattact
gcaatgcaacatgctgacgaggaagaggatataaacaaagtgttaagatacttctcttat
gaacacttctacgttatatactgcaagttttgggagcttgatcaagatcatgatttcttg
atcgataaggagaacctcatcagatatggtaaccatgcccttacctaccggatagtcgat
agaattttttcacagattccaagaaaatttacttgcaaggttgaagggaagatgggatat
gaagatttcgtttacttcatgctgtcggaggaagataaatcatccgcacctagtcttgag
tattggttcaagtgtatagatttggatggaaatggtgtgctgacatccaatgaaatgcaa
tttttttatgaagagcagttgcatcgcatggagtgcatggcacaagagcccgtgctcttt
gaggatattttgtgtcagatggttgacatgattggaccagagaatgaatgccatattacg
ctacatgatctgaaaggctccaggctgtctgggaatgtcttcaatatccttttcaatctc
aacaaattcatggcttttgagacacgcgatccatttttgattcgtcaggaacgtgaagag
cccaccttgacagagtgggatcgttttgcacatagagaatatattaggctttcaatggaa
gaagatggtgaagacgcttctaatggaagtgcagaagtttgggacgaatcacttgaggct
ccgttctga
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