Papaver somniferum (opium poppy): 113349926
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Entry
113349926 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113349926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113349926
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113349926
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
113349926
NCBI-ProteinID:
XP_026449759
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Position
2:complement(180630214..180635786)
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AA seq
992 aa
AA seq
DB search
MEQLRPNPLIRRFDHSTSNNFYSPRNVRRKTFNERVDNTEALFTSKSLTEGKYRYRRGDV
SDIIDYSVPSMTEQLDGDSMYGSVTKVIQALSAKRCEILNSLRELYPSLLSHLVFSVGTP
PRGSRGTSNVVSQGIIDLDGEDEIHDLGPVSDERMETPAGQIVLHTPGCNNAMVMAGSES
DDRYMIGNNKPDYSYDLEVSKMRRDPNYCGIQISTDAQRIGSQVRTPYHVEQRQRRNSTT
QNDNQGIAPVGAQMSTPYDFQLLFPKKPVGEKPAKHVNGSDQRKRNVEKEDKGVCGETVI
EKSKGVYVGVQDDIMSDSGSGGEDDGLGDIWTEMNLALECSKDASSALGTAMEHIAEEEE
EDECEHSFVLKDDLGYVCRICGVIEKSIEQIFDFQWGKGTKTTRTSYMSQYRTTKDCERV
EGSQFTIANASDQDFGVAEISVHPRHMKQMKPHQIEGFNFLLRNLVCDSPGGCILAHAPG
SGKTFMIISFMQSFLAKYPNARPLVVLPKGILGTWKREFERWQVEEIPLYDLYTSKADSR
AQQLDVLKQWVEHKGILFLGYKQFASIVSNSTSSIAAAACHDILLKVPTILILDEGHTPR
NETTDVLYSLSQVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKLDTSKAVVRRVMSR
VQIAVRKQVKNSGGDTMFYDLVEETLQNDQDFRRKVTVIQDLREMTGKVLHYYKGDFLDE
LPGLIDLTVLLTLNPKQKHAVEKLRKLDKFKRSSMGSAVYVHPQLKEHAESSATGEKGHI
HEAKIDELLNKVELNHGVKTKFFLTLLALCESAGEKMLVFSQYLLPLKFLERLVVKTRGW
SLGKEIFVISGDSSQDQREISMERFNNSKDAKVFFGSIKACGEGISLVGASRLLILDIHL
NPSVTRQAIGRAFRPGQTKKVYAYRLVAADSPEEEDHHACFRKELISKMWFEWNEICGYH
DFAMEEVNTKDLDDSFWDSPSLGEDVKALYKR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacttcgacctaatccactcataagaagatttgatcactcgacttctaataat
ttttattctccaagaaatgtgaggaggaaaacatttaatgaaagagttgataataccgag
gctttgtttacttcgaaatcacttacggaagggaaatataggtaccgaaggggtgatgtt
tctgatatcattgactattccgtacctagtatgacggaacagttggatggggatagtatg
tatgggagtgttacgaaagtgattcaagcgctttctgctaagagatgtgagattttgaat
tctctgcgtgagttgtatccatcactgcttagtcatctcgtgttttcagtaggaacgcct
ccgagaggtagcaggggaactagtaatgtggtatctcaaggtattattgatttggatggt
gaagatgagattcatgatttgggacctgtttctgatgaaagaatggaaacaccagctggt
cagattgttttgcatacgccagggtgtaacaatgcaatggtgatggctggttcagaatca
gatgaccgatatatgattggaaataacaaacctgattatagctatgaccttgaggtgtct
aagatgagacgtgatcctaattactgcggtattcagatatctaccgatgcacaacgaata
ggatctcaagtgcggaccccataccatgtagagcagcggcagagaaggaattctactact
caaaatgataatcaggggattgcacctgttggagcacagatgagcactccatacgatttc
cagttgctctttccaaagaagccagttggtgaaaaaccagctaaacatgtaaatggaagt
gatcagcgaaagaggaatgttgagaaagaagataaaggtgtttgtggcgaaacagtaatt
gagaaatcaaaaggagtatatgtaggtgtacaagatgatataatgagtgactcgggcagt
ggtggtgaagatgatgggcttggtgatatttggacggagatgaatctcgcattagaatgt
tccaaggatgcttcttcggctctgggtactgctatggaacacattgcagaagaagaggag
gaagacgaatgtgagcattcttttgttctcaaggatgatctgggatacgtctgtaggata
tgtggggtgattgaaaaaagcattgaacagatatttgacttccagtggggaaagggaacc
aagactaccagaactagttacatgtctcaatatcgtacaacgaaggactgcgaacgagtt
gaaggatctcagtttactattgctaatgcatcggatcaagattttggtgtcgctgagata
tcagtgcatccgaggcacatgaagcaaatgaagcctcaccaaattgaaggtttcaatttc
ttgcttaggaacttagtgtgcgacagtccaggtggttgcattttggcacatgccccaggg
tctggaaagacctttatgatcataagttttatgcaaagcttcctggcaaaatatccgaat
gccagaccacttgtagtgttgcctaaaggaatcctgggtacttggaagagggagtttgaa
agatggcaggttgaagaaattcccctgtatgacttgtatacttcaaaagccgatagtcga
gcacaacagttggatgttttaaaacaatgggtggagcacaaaggaatcttgtttcttggg
tataaacaatttgcaagcatcgtatctaacagtaccagtagcatagctgcagctgcctgc
catgatatactcctgaaggttcctactatacttattttggatgaaggccacacgcctaga
aacgagaccacggatgtgctctactccctttcacaggttcaaactcctcggaaggttgta
ttatctggaaccttattccagaatcatgtgaaagaggttttcaacattttgaatcttgtg
cgcccaaaatttctgaagttagatacatcaaaggctgttgtgaggagggtcatgagtagg
gtgcagattgctgtcaggaagcaggttaagaatagtgggggagacacaatgttctatgat
ttagttgaagagaccctacaaaatgatcaagatttccgaaggaaagtcacagtgatacaa
gaccttcgtgagatgacaggcaaggttttacactactataaaggtgattttctggatgaa
cttccaggactcattgatctgactgtacttctcactcttaaccccaaacagaaacatgca
gtagagaaattgagaaaattggataagttcaagagaagttccatggggagcgcagtctat
gttcaccctcagttgaaagaacacgcagagagttccgccacaggagagaaaggacacatt
cacgaggccaagattgatgagcttcttaacaaagtagaactcaatcatggtgtgaaaaca
aaatttttcttgactttattggcactttgtgaatctgctggggagaaaatgttagttttc
agtcaatatctcctcccactgaagtttttagagaggctagtggtgaaaactagaggctgg
agcctggggaaggaaatatttgtcatatcgggggactcaagccaggaccagagggaaata
tcaatggaacgttttaataattctaaggatgcaaaagtcttctttggttcgataaaggca
tgtggggaaggaatatctctagtgggggcatctcgcttactgattttagatattcatctc
aatccctcggttacccgacaggcaattggtcgtgcattccgacctggtcaaacaaaaaaa
gtatatgcttataggttggtggcagcagactctcccgaggaggaagaccaccatgcttgc
tttcggaaggagttaatttcgaagatgtggtttgagtggaatgagatttgtggttaccat
gacttcgcgatggaggaagtcaatacaaaggacttggatgattcgttctgggatagccct
tccttaggtgaagatgtgaaagcattgtacaaaaggtga
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