Papaver somniferum (opium poppy): 113349928
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Entry
113349928 CDS
T05758
Name
(RefSeq) structural maintenance of chromosomes protein 1-like
KO
K06636
structural maintenance of chromosome 1
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113349928
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113349928
Meiosis-specific proteins
Cohesin complex and associated proteins
113349928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
113349928
NCBI-ProteinID:
XP_026449761
LinkDB
All DBs
Position
2:180683565..180693114
Genome browser
AA seq
1223 aa
AA seq
DB search
MPSLSYHGKIVRLELENFKSYKGLQVIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVKSA
HLRGAQLKDLIYAFDDKEKEQKNRKAFVKLVYQLSNGVELQFRRTITSAGGAEYRLDEKV
VTWDEYNNKLKSLGILVKARNFLVFQGDVESIASKNPKELTGLLEHISGSDELKKEYEAL
EEQKGRAEEKSALVYNKKRTVVMERKQKKEQKEEAEKHNRLQDQLKALKKDHFLWQLLNI
ERDTEKTKAELEEEKKSLEEIMMDQEKYELEETKKGKEQSGHSKAITLCERKIAEKKVKL
DKTQPELLKSKEELSRISSKIKSRKKELEKKKEERRKHGEEIKRLESDFHQISKKLDDLH
EKSQHGSGKLQLEDNKVLEYHRIKEEAGMKTAKLREEKEVQDRQQHADMEARKNQEENLQ
QLKTREQELESQVEQMQARQEKIVESLRKHKEERASVKKDLNKMQDEHRESKNKYESLKV
KISEVEKKLRDLKADKYENERDVRLSQAVGTLKRLFPGVHGRITDLCRPTQVKYNLAVTV
AMGRFMDAVVVEDEHTGKECIKYLKQQQLPPQTFIPLQSVRVKPVSEKLRTLGGTAKLIF
DVIQFDPSLERAILYAVGNTLVCDKLEEAKDLSWSRERYKVVTVDGILLTKSGTMTGGIS
GGMEARSKQWDDKAIGDIKKTKERYELEMESLGSIREMQMKESEASGKISGLDKKIQYSE
IEKVNIKDKLAKLKQEKLNVKEEISRIEPELRKLQNQTEKRKKEIEKLENRINVIVDRIY
DEFSKSVGVNNIREYEESQLKRAQQTAEERISMSNQMSKLKSQLEYEQKRDMDSRIRELE
SNLDSLDKELKRIQTKEEKDKQGTEKYTSEIDQLNTEVQELKSQLDVCEKAMQKMKKQRS
SILTRIGESKSRINLKETQIEQLHSQRQEIIEKCELEQIELPIVDDPMETGSSMQLPVFD
YSQLSRSHQQEPRPSEREKLDLEFKHKMDNLVSEIERTAPNLKALDQYVALQEKEREVVE
EFEAARKEEKEITDRYNAIKQRRYELFTEAFNHISSNIDKIYKQLTKSSTHQLGGTAYLN
LENEDDPFLYGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVD
AALDNLNVAKVAGFIRSKSCENSVRRSDSSNQEDSEGGNGFQSIVISLKDTFYDKAQALV
GVYRDSERGCSRTLTFDLTKYRE
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgccatcactaagttatcacggaaagattgttagattggagttagaaaacttcaaatca
tataaaggattgcaagtaattggtcctttttatgattttacagcaataataggtccaaat
ggagcagggaaatcgaatctaatggatgctattagttttgtacttggtgtgaaatctgct
cacttacgtggtgctcaattgaaagatctgatttatgcatttgacgataaagaaaaagaa
cagaagaatagaaaagcttttgtaaaactcgtctatcaattgagtaacggagttgaactt
caatttagaagaactattactagtgctggtggtgctgaatatagacttgatgagaaagtt
gttacttgggatgagtataataataagttaaaatctcttgggattctagttaaagcaaga
aatttccttgtttttcagggcgatgtggagtcaattgcatcaaagaatccaaaagaatta
acagggcttttggaacatatctctggttcggatgagcttaagaaagaatatgaggctctg
gaggaacaaaagggcagagctgaagaaaaatcagcacttgtctataataagaaacggaca
gttgttatggaaaggaagcagaaaaaggaacagaaagaagaggctgaaaaacataaccgc
ctacaagatcaactgaaagctttgaagaaggatcactttttatggcaattacttaatatt
gaaagggatacagagaagacaaaagccgaactcgaagaagaaaagaagagcctcgaagaa
attatgatggaccaagagaagtatgaacttgaagaaacaaaaaaggggaaagaacaatct
ggacactcaaaggcgattacgctatgtgaaagaaagattgccgaaaaaaaagttaaactt
gataagacgcaacccgagcttctgaagtcaaaggaggaattatctcgaatcagttcaaaa
ataaaaagtaggaagaaggaactagagaaaaagaaagaagaacggagaaagcatggagaa
gaaatcaaaaggctagaaagcgacttccaccagatttcaaaaaaactagacgacctacat
gaaaagagtcaacatgggtctgggaaacttcagctggaggataacaaagttctggagtat
cacaggattaaggaggaagctggaatgaagactgcaaaattgcgagaagaaaaagaggtt
caggataggcaacagcacgctgatatggaagcgcggaaaaatcaggaagaaaatcttcaa
cagttaaaaacccgcgagcaagagctggagtcacaggtggaacaaatgcaagcaaggcag
gaaaagatcgtggaatccttacggaagcacaaggaagagcgtgccagtgtaaaaaaggat
ttaaacaagatgcaagatgaacatcgggaatccaagaataaatatgaatctttgaaggta
aagattagtgaagtcgaaaaaaagttgcgtgatctaaaggccgataagtacgaaaatgaa
cgtgatgtaagattgtctcaagcagtcgggactctcaagcgcctttttcctggagtccat
ggtcgcataactgatctctgtagacctacccaagtcaagtataaccttgctgttactgtt
gccatgggtagatttatggatgctgtcgtggttgaggatgaacatacagggaaagaatgt
attaagtacctgaagcaacagcagcttccccctcagacttttatacctctacagtcagtt
cgtgtgaaaccagttagtgagaagttgagaactttgggcggaactgcaaagctgatcttt
gatgttattcaattcgacccatccttggagagggctatattatatgcagtgggaaatact
ctggtttgcgacaagcttgaagaagcaaaggatcttagctggagcagggagaggtacaag
gtggtgaccgtcgatgggattcttctaaccaagtcaggtacaatgactggtgggattagt
ggcgggatggaggctaggtcaaagcagtgggatgataaagcaattggagatatcaagaaa
accaaagaacggtatgagttggagatggaaagccttggatctatcagagaaatgcagatg
aaagagtccgaggcgtctggaaaaatctctggtcttgataagaagatccagtactcagaa
atcgagaaggtgaacattaaggacaagcttgcaaagctcaagcaggaaaagcttaatgtt
aaagaagaaattagtaggattgagcctgaacttcgaaagttgcaaaaccaaactgagaaa
aggaagaaagagatagagaagcttgaaaacaggattaatgtgattgtggatcgcatttat
gatgaatttagtaaatctgtgggagtgaacaatatccgtgaatatgaagagagtcagctc
aagcgtgcacagcaaacagctgaagaaaggatcagcatgagtaaccagatgtcgaagttg
aagtcccaattggagtatgagcagaagagagacatggactcacggatcagggagctagaa
tctaatcttgactctttggacaaagagctaaaacggattcagacaaaagaggagaaagac
aaacaaggcactgagaagtataccagtgagatagaccaattgaatacagaagttcaagag
ttgaagtctcagttggatgtgtgtgagaaggccatgcagaaaatgaagaagcaacggtct
agcattttgacaagaataggggaatccaaatctcggataaatctgaaggagacgcagatt
gaacaattacattcacagaggcaagaaataatagaaaaatgtgaactagagcagatagaa
cttcctattgtggatgacccaatggaaacaggatcgtctatgcagttacctgtttttgac
tatagccagctaagcagatcacatcagcaagagccgcgcccatcggagagggagaagctt
gatttagaatttaaacacaaaatggataacttagtctcagaaattgaacgaacagctccc
aatttaaaggcactggaccaatatgtagctcttcaagagaaggaaagagaagtggttgaa
gagtttgaagctgccaggaaagaagaaaaggagatcactgataggtacaatgctatcaaa
caaagaaggtatgagctttttacagaagctttcaaccacatctccagtaacattgacaag
atttacaagcaacttacaaaaagtagcacacatcagcttggtggaactgcatatctaaat
ctggaaaatgaggacgatcctttcttatatggcatcaagtacacagccatgcccccaaca
aagcgtttccgtgacatggaacaactctctggtggggagaagaccgtcgcagcacttgca
ctgcttttctctatccacagctacaagccttctccatttttcatcttggacgaggttgat
gctgcattggataatttgaacgttgccaaggttgctggcttcatcaggtcgaaatcatgc
gagaatagtgttagacgtagtgatagtagtaatcaagaggactctgaaggtgggaatgga
ttccagagtattgtcatctctctcaaggataccttttacgataaggcccaagcattggtt
ggggtttacagggactccgaaagaggttgctcgaggacgctaacgttcgacctcactaaa
tatcgagagtag
DBGET
integrated database retrieval system
