Papaver somniferum (opium poppy): 113350068
Help
Entry
113350068 CDS
T05758
Name
(RefSeq) U3 small nucleolar RNA-associated protein 20-like isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113350068
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113350068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
Peptidase_M78
HK97-gp10_like
Glyco_hydro_53
Motif
Other DBs
NCBI-GeneID:
113350068
NCBI-ProteinID:
XP_026449931
LinkDB
All DBs
Position
2:191453210..191467545
Genome browser
AA seq
2726 aa
AA seq
DB search
MATAAESMAVKSLNTGPSRKRFIFKSLAQRMEEIDIDVYRSYDTRKSEPSEGSTYVKDCL
VEWRELNTAEDFISFYEEMMPWVQTLPQVLEMKDGILTKLLNRLQLQARLSLQPILRLIA
ALSRDLQKDFFPFLRRVADSLFLLLESGADREPEVVQEIFISWSNIMVNLQKYLIQDINH
LLKITRRLRYYPKDYVQEHMAECVSYLLRNSAVAQAKKGIQKITAEVVKKPSNVVKSGVS
ALLWHVMRGTSSSFHSRTENEFLPFLLDGSIIGIGDEQGSDTVVEVVTTALGRACEELQP
QELKKMWNCLIRKISDCVCNGSLLLLSHLLHILTSTVRFSPRGKISDYQRMLDLVELLIE
KVIIMPLRGSDSAENCSFEDFDGVLQLMLSLLDGFNFSDESVIRGIAGKWASVFQLRNKS
LVKFIEELLHKKDEIRNVFGDYILSALNEMVVLPSSVEQKEISQSSLGPEEVIYLLLTYF
EKVEGVKKPEEVSRLCNFLRQYICDWISMINDISHGDSSRMRLDESKLALIWGAVTCYHP
VFGLTGNPSLVMGLIDALDRLLTINADHIAGISKSNWQSLVGAALVSYTRLRPCAKAELA
ETRKIVSIAEKFKSSPQVLFAVAEFLEHTNGFSSIVDSSEDTHYHPEIRREHAVNAFADN
LCLPDKLIRISTLRILSHYELLGKQFYTSDQPAEKKWKTEFSQSGTEESDCNNVTQLLLA
IEKDSISVSTSRHVVMLISKIQMAISAGRVPEAYVTLLLNGIIGVFHKRFGLLWDPAVQC
LTVLMEKHLLLVWERFVCYLEQCQEKFLTSDNHLESVNVESSSTSSDLVECFHSFVAPNS
DVTPCTTILSLLLQSLQKVQVIAESRSRQLVPLFLKFLGYDDGDVLSVGSFKSHACKGKA
WRGVLKEWLNLLKLMRNSKSLYRSQQLKEVLIIRLLDENDAEIQMIVLECLANWKCDCLL
PYVEHLKNLITSKNLREELVTWSLSKESHHIQDQHREYLIPIAVRLLIPKVRKLKTLGSR
KHASVHHRRAVLGFLGQLDVGELPLFFALLIKPLLPMSSDWFWRSCGSSIEEFQASNVVK
GLTVDEIEEISWKKRYGFLHVIEDIFKSFDEFHLKPFLNLLMSFVARIMEACTYRLDGAK
NSEATQIENLASDDVSVHEASGEDSLTTTTGTKQYKDLRSLCLKIISSVLSKYEDHDFGG
EFWEMFFVSVKALIDCFKQEGSSSEKPSSLFSCFLAMSRSQTLVSLLHREESLVPSIFSV
LTVKTASGAIISSVLSFIENLLNLDNDLSNHGDLAVKTILLPNLNTLIHSLHDLFYCKQR
NYIKSAGKAELRIFKLLSAYIVEPSGAKQFVEILLPFLGNNPKHSDECLEVLKVIKGVLP
KLGGIITDKILKAVAPLLLSAGVDTRLSICDILNGLALQDPSVVFLAKFVHDLNAMSMSE
MDELDYDTRINAYESVNSGFFYRLRKDHTLVILSHAVHDLSSEELIIRQSAYRLLLSFIQ
FSSEVLGSDPMDCEEMIEPVVASETWTKEYVESIIKNFILKHMGEAMSREISIQREWIAL
LREMTLQLTELPSLKSIGNLASVDDAEKDFFNNILHLQKHRRAKALSRFRKVIVAGNFSE
DITKKIFVPLFFKMMYDVQPGKGEHIRDACVDSLAAISGHMKWESYLSFLLGCFREMTLK
PDKHKILLRLICSVMDHFHFSGIVSQDLKDNVPEISPAIIGLNVDATTRSCTTTGVPKEI
QVCLQKKVLPKIQKLLVDSEGVDVTINVAALKLLKLLPLDTMESQLPSIIHRISNFLKNR
LESIRDEARLALAACSKELGIEYLQFLVKVMRGALKRGYEMHVLGYTLNFILCKAVSNSV
AGKLDYCLEELLSVVENDILGEVAEEKDVEKIASKMKETRKRKSFETLELIARNVTFNES
NAMKLLSPVKAHLQKYLTPRKKGKLETMLKQIATGIECNTSVDQKDLFTFVYGLIKDGMT
EEAPKGKDLLLTKPSKISSKALSNKKDASSHLVSYGSQSSHVITGFALGLLHNRLKKMKL
GVKDVQLLSMLDPFVELLGNCLASKYEAILSSALRCLTPLVRLPLPTLESQADKIKSLLL
DIAQKSGPSNSPLMESCLSLLTVLLRSTRITLSDDQLHMLIQFPLFIDLEKNPSFTALSV
LKAIVSRTLVVHEIYDIATRVSNLMVTSQSDPIRKKCSQILMQFLLNYRLSTKRLQQHMN
FLLENLSYEHASGREAVLEMLHVIITKFPKSILDAESYAFFVKLVACLANDTDSKVRSMI
GTVLKRLIECTSQKSLVPILESSVSWYVSDNQMLWSVAAQTLGLLVEVLKKRFQSHVKIV
LPVHKKIMKYALDGTKQPDTTNEESRTPYWKQTYYSMIMLEKILREFPELYWEKDFEDIW
EAICELLLYPHMWIRNVSNRLVASYFASASEREKSQKLEVGSLLIMKPNRLFAVAVSLCC
QLKAPLIDDKEAKVLTQILVFAISGVHKLAGQSESLHLQEFWSTLELNEQSHFLKAFHLL
GSRKGRMLLGLLTSDVVDPVDQVGSVERADVATDAVEQADAAMNSVEQVDGNRLQSILVS
PLLKKIGKVALQMDDMQMKIVFNSFSMISIEIGKEGCQQHAYDMLLPLYKVSEGFAGRVI
TDDLKQMAADVLKKIKDVIGDDSFVRVCNEIRKNLKAKRDKRKNIEKVMAVVNPMRNAKR
KLRVNAKHRANKKRKIMIMRMGRSGY
NT seq
8181 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcagcagaatcaatggcggtaaagtctctcaataccggccctagccgtaaa
cgtttcattttcaagagtttagcacagagaatggaagaaatagacattgatgtttataga
agttatgatacaaggaaatcagaaccatccgaaggttctacttatgttaaagattgtctc
gttgaatggagggaattgaatacagcagaggattttatttcgttttatgaggagatgatg
ccatgggtacaaacgttaccacaagttttggaaatgaaagatgggattttgactaagctt
ttgaatagattacaacttcaagctagattgtctcttcaaccaatattaaggttgattgca
gctctttctcgtgacctccaaaaagatttctttccctttctccgaagggttgctgattca
ttattcctcctccttgaaagtggagctgacagagaacctgaagtggttcaggagattttt
atatcatggtcaaatatcatggtgaacttacagaagtatctcatacaagacattaatcat
cttttgaagatcacaagacgtttaagatactatccaaaggactatgtccaagagcatatg
gcggagtgcgtctcttatttgctgagaaattcagctgttgcgcaagctaaaaaaggtatt
cagaagatcacggcggaagttgtaaagaaaccatcaaatgtggtaaaatctggtgtcagt
gctttgttgtggcatgttatgagaggaacttcttcaagttttcattcaaggaccgagaat
gaatttctgccatttctgcttgacggttccatcattggcatcggtgatgagcaaggctcg
gatactgttgttgaagttgtgactactgcccttggaagagcgtgtgaggaactgcaaccc
caggagttgaaaaagatgtggaattgcttaatcagaaaaatatctgattgcgtttgtaat
gggagcttgctgctccttagccacctattgcatattcttacatctactgttcgtttcagt
cctaggggtaaaatttctgattaccaacggatgcttgaccttgtggagttgcttatagag
aaagtcatcatcatgcctttgcgtggtagtgatagtgcagaaaattgctcttttgaagat
tttgatggagtgctgcagttaatgctgagtcttcttgatggatttaattttagtgatgag
tcagtgataagaggaattgcagggaaatgggcttctgtatttcagctgcgaaacaagagc
ttggtgaagttcattgaagagctactacacaagaaggatgagatacgaaatgtctttgga
gattatatactaagtgcgttgaatgaaatggttgtcttgccatcgtcagtggagcagaag
gaaatctcacaatcatcactggggccagaggaagttatctatttgctactgacatacttc
gagaaagtggaaggtgtcaaaaaaccagaagaggtttcaaggctgtgcaatttcttgcgg
caatatatttgcgattggatttctatgataaatgatatatcgcatggggattcatcaaga
atgcgcttggatgagtctaagttggctcttatctggggagcagtgacctgctaccatcct
gtttttggtttaacaggaaatccatcactagtcatgggtttgatagatgcgcttgatcgg
cttcttacaattaatgctgaccatattgcaggtatatctaaaagcaattggcaaagtttg
gtgggtgctgctctagtttcttatactagactgcgaccatgtgcaaaggcagaacttgca
gaaacaagaaaaattgtatctatagcagaaaaatttaagtcatcgccccaagttttgttt
gctgtagctgaatttcttgagcacactaatggattttcgagtatagtagactcgagcgag
gatacacattatcatccagagattaggagagagcatgcagtcaatgcatttgctgataat
ttatgtctacctgataagttgatacgtatatcaacgctgaggatcttatctcattatgaa
ctgctaggcaaacaattttatacaagtgaccagcctgctgagaagaagtggaagactgaa
ttttctcaatcaggcactgaagaaagtgattgcaacaatgttactcagctcctcctcgcc
attgagaaggattctatatcagtttctaccagcaggcatgtcgttatgctaatctccaaa
atacaaatggctatttctgctggaagggtacctgaagcttatgtaactctacttttgaat
gggattattggtgtatttcataagcggtttgggcttctctgggatccagcagtacagtgc
cttacagttttaatggagaaacatttgctgcttgtatgggaaagatttgtttgttatctt
gaacaatgccaagaaaaatttctcacctccgacaatcaccttgaaagtgtaaatgttgaa
tcctcaagcacgtcaagtgatctggtcgagtgcttccattcatttgttgctcccaattct
gatgtcaccccatgcacaaccattttgtctttgctgctgcagtcattacagaaagttcaa
gtcattgcagagtctcggtctcgccaactcgtacctcttttcttgaagtttttgggctat
gatgatggtgatgttttgagtgtggggtcgtttaagtctcatgcttgtaaaggaaaagcc
tggaggggtgttcttaaggaatggttaaacttgttgaaattgatgagaaactctaagtct
ttatatcgaagccaacaactgaaagaggttctgataatcaggcttcttgatgaaaatgat
gctgaaatacaaatgattgtgcttgaatgcctggcaaattggaaatgtgattgcttgctc
ccatatgttgaacatctgaaaaatttgattacttcaaaaaacttacgtgaagaacttgtg
acatggtcattatctaaggaatctcatcatatacaagaccaacacagagaatatttgatt
ccaattgctgtaaggctgctgatacccaaagttagaaaactgaaaacattaggctctcgt
aagcatgcaagtgtacatcatcgaagggcagtgcttggctttttaggtcaacttgatgtt
ggcgagcttcctcttttttttgctttactaataaagccattattacccatgtcaagtgat
tggttttggagatcttgtggaagttctattgaagaatttcaggcatcgaatgttgtgaag
ggtctcacagttgacgagattgaagaaatttcttggaagaagagatatgggttcctacac
gtgattgaagatatattcaaatcttttgatgaatttcacctgaaaccatttcttaatctg
ttgatgagttttgttgcccggataatggaagcttgcacgtataggcttgatggcgctaaa
aacagtgaagctacacaaatcgaaaacttagctagcgatgatgtctcagtacatgaggca
agtggagaagactcgttgacgacaaccacaggtacaaagcagtacaaggacttgagatcc
ttatgcttgaagataatttcgtctgttcttagtaaatatgaggatcatgacttcggcggc
gaattctgggagatgttctttgtgtctgtaaaggctttaatcgactgtttcaagcaagaa
ggatctagtagtgagaagccaagttcacttttttcttgttttcttgcaatgagcagaagt
cagacacttgtttcgctcttgcatagagaggagagtctcgttccttctatattttcagtt
ctcactgtgaagacagcgtcaggtgcaattatatcttctgttctcagcttcattgagaat
ctcttgaatctggacaacgatttaagcaaccatggagatcttgcggtaaaaacaatttta
ctgcctaatcttaacacgctcatccacagtttacacgatctattttattgcaaacaaagg
aattatatcaaaagcgcagggaaagcagagcttagaattttcaaattgttatcagcatat
atcgtggaaccatcaggggcaaaacaatttgtcgagattttgctgccattcttgggaaat
aatcctaaacactctgatgaatgcttagaagtcttgaaagtcattaaaggggtcttaccc
aaattgggaggtataattactgacaaaatattgaaagctgttgctccactacttttatct
gccggagtggatacaagattgtccatttgtgatattttgaatggtttggcactacaggat
ccatctgtagtcttcctggcaaaatttgtccatgatttgaatgcaatgtctatgtctgaa
atggacgagcttgattatgacacaagaattaatgcttatgaaagtgtcaactcagggttc
ttctatagattaaggaaagaccacacattagttatcctgtcacacgctgtgcatgatttg
tcatctgaggaattgattattaggcaaagtgcgtacaggcttttgttgtcgtttatacag
ttctcctccgaagttttgggttctgatccaatggattgtgaagaaatgattgaacccgtg
gtagcgtccgagacttggactaaagaatatgtagaatccattattaagaacttcattctt
aagcatatgggagaagcaatgagcagggaaatttccattcaaagggaatggatagcgttg
ctgcgagaaatgacattgcaacttactgagctaccgtccctaaagtcaattggaaatcta
gctagtgttgatgatgcagaaaaggatttcttcaacaacatccttcacttgcagaaacac
cggagagcgaaggcgttgtcacgctttaggaaagttattgttgctggtaacttctcagag
gatattacaaaaaaaatatttgtccccctcttcttcaagatgatgtatgatgtacagcct
gggaaaggagaacatatcagagatgcatgtgtggactcgcttgctgcaatatctgggcac
atgaaatgggagtcatacctttcgttcttacttggatgttttcgagagatgaccttaaaa
ccggacaagcacaagatcttactacggctaatatgttccgtcatggatcattttcacttt
tcaggaattgtgagccaagatctgaaagataatgtccctgaaatttcacctgccatcatt
ggtttgaatgttgatgctacaacgcggtcttgcactacaactggtgtccccaaggagata
caagtctgccttcagaagaaagtactcccgaagattcaaaaattactggtagactccgag
ggagttgatgttaccataaatgttgctgctctgaaattactcaagttactcccactagat
accatggaatcacaacttccaagcatcattcaccgcatttccaacttcttaaagaatcgt
cttgagagtatacgagatgaagctaggttggctttggctgcatgttccaaggagttaggg
attgaatacttgcagttcttggttaaagttatgcgaggcgccttgaagcgagggtacgag
atgcatgtgttgggatacactctcaatttcatactgtgtaaggctgtttcaaattctgtt
gccgggaagctggattactgtttggaggagcttctatcggtagtcgagaatgatattctt
ggtgaagttgctgaggaaaaagatgtagaaaagattgcatctaaaatgaaagaaaccaga
aaaagaaaatcatttgaaacactagaactcatagcacgaaatgttacgtttaacgaatcc
aatgcaatgaagttgctttctcctgttaaagctcatctacagaagtatctcacaccaaga
aagaaaggaaaactagaaacaatgttgaagcagatagctactggtatagaatgtaacact
tctgttgatcagaaagatctgttcacctttgtttatggactcatcaaggatgggatgacg
gaagaagctcccaaaggtaaagatttgttactaacgaaacccagtaagatttcgagcaaa
gcattatccaacaaaaaggatgcttcctctcatcttgttagctacggatcacaaagttct
catgttattacggggtttgctcttgggttactgcacaaccgcctgaagaaaatgaagttg
ggtgtcaaagatgtgcaattattatccatgttagatccttttgttgagctattaggtaac
tgccttgcgtccaagtacgaagcgatattatcttcagctcttagatgccttactccattg
gtgagattacctttgccaacactagaatctcaggctgataaaatcaagtctttactattg
gatattgcccaaaagtcaggacctagtaacagccctcttatggaatcttgtctaagcttg
ctaacagtacttctccgaagcactaggatcaccttatccgatgatcaattgcatatgctt
atccagtttcccctttttattgatcttgagaagaatccttcctttaccgccctttcagtt
ctgaaagccattgttagccgaactctggttgtccatgaaatctatgatattgcaacacga
gtttcaaatctgatggtaacaagtcaaagtgatcctattcgtaagaagtgtagccagatt
ctcatgcaattcttgcttaactatcgtctttccaccaaacgtttgcaacaacacatgaac
ttcttgcttgaaaatctgagttacgagcatgcgagtggtagagaagctgtgcttgaaatg
ttacatgtcataatcaccaaattcccgaaaagtattttggacgcagagtcgtatgctttt
tttgtaaagctggtggcctgtcttgctaatgatacagatagtaaagttcggtccatgatc
ggtactgtgctaaagcgtttgattgaatgtaccagccaaaaatcacttgttcccattttg
gaatccagtgtctcgtggtatgtgagtgacaaccagatgttgtggagcgttgcagcacag
accctagggttactagttgaagtcctgaagaaacggttccagagtcatgtcaaaattgtc
ttgccagtgcacaagaaaatcatgaagtatgcccttgacggcacaaaacagccagatacg
actaatgaagaatctaggacgccgtactggaaacagacttactactcgatgattatgctg
gagaagattctacgcgaattcccagaactgtactgggaaaaggattttgaggatatttgg
gaagcaatttgtgagctcctgttatatccccacatgtggatacgcaacgtatcaaatcgt
ctcgtagcttcatattttgcgtcagcatctgagagggagaaatctcagaagttggaagta
ggaagtttgttaattatgaagccgaatagactttttgcagtagcggtttcactctgttgc
cagcttaaagcaccacttatagatgataaagaggccaaagttctcactcaaattcttgtg
tttgctatatctggcgtgcacaagttggctggtcaaagtgaatccttgcatttgcaggaa
ttctggtctaccctcgaattgaatgagcaaagccattttctcaaggctttccacctgctt
ggatcaagaaaggggaggatgttacttgggcttcttacgtccgatgtggtggatccagtt
gaccaagttggttcagtagagcgagctgatgttgcgacggatgcagtggaacaagctgat
gctgccatgaactcagttgaacaagttgatggaaaccgtctccagtcaatactcgtctca
ccgctgcttaagaaaatcgggaaagtcgctcttcaaatggatgatatgcagatgaagatt
gtcttcaacagctttagtatgatttcaatagaaatcggaaaagaaggttgccaacaacat
gcctatgacatgctgctaccgttgtataaagtctcagaaggatttgctgggagagtcatc
acggatgatctcaagcaaatggctgcagacgttcttaaaaaaattaaagacgtaataggt
gatgacagttttgtgcgagtgtgcaatgagataaggaagaacctcaaggcgaagagggac
aagaggaagaatatagaaaaggttatggctgttgtaaatccaatgcgaaatgcaaaaaga
aagttgagagttaatgctaaacatcgtgcaaacaaaaagaggaagataatgataatgagg
atggggagatctggttattag
DBGET
integrated database retrieval system
