Papaver somniferum (opium poppy): 113350173
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Entry
113350173 CDS
T05758
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113350173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113350173
03012 Translation factors [BR:
psom03012
]
113350173
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113350173
Translation factors [BR:
psom03012
]
Eukaryotic type
Release factors
113350173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
113350173
NCBI-ProteinID:
XP_026450049
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All DBs
Position
2:198079638..198082642
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AA seq
436 aa
AA seq
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MSDSQDTDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVARVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIMTDDGKEKKVTIDFEPFKAIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQMYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQVKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKNLIGKYFEEISQDTG
KYVFGVEDTLKTLEMGAVETLIVWENLDINRYVLKNSATAEIVIKHLNKDQEADQSNFRD
SETSAELEVQEKTSLLEWFANEYRKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RQFDELSDGEVYEDSD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagtcaggatactgataagaatatcgagatatggaagatcaagaaattgatt
aaagcgctagaagctgctagaggtaatggtacaagcatgatttctctcatcatgccacca
cgagatcaggttgctcgggtcactaagatgttgggtgatgaatttggtactgcctcaaac
atcaagagtagagttaaccgtcagtcagtattgggtgcgattacctctgctcaacagaga
ttgaaactttacaataaggtccctccaaatggtttagttttgtacacaggaactatcatg
acagatgatgggaaggagaagaaggttacaattgattttgagcctttcaaggcaattaat
gcatcattatacctttgtgataataagtttcatacagaggctctaaatgaacttttggaa
tctgatgacaagtttggtttcatagtcatggatggaaatggtacactttttgggacacta
agtgggaacacacgtgaagtgcttcataagttcacagtcgatctcccaaagaaacacggt
agaggaggacaatctgctctgcgttttgctcgtcttcgaatggagaagcgtcacaactat
gtgagaaaaactgctgagcttgcaacacaaatgtacatcaacccagccactagtcagcct
aatgtctcagggttaattcttgctggatctgctgatttcaagacagagctgagtcagtcc
gatatgtttgatccccgtcttcaggtcaagatactgaatgtggttgatgtttcttatgga
ggtgagaatggtttcaatcaagccattgagctttctgccgagattctatctaatgtgaag
ttcattcaggaaaaaaatttgattggtaagtacttcgaggagattagtcaagacacgggg
aagtacgtatttggtgtggaagatactctgaaaactctagaaatgggtgccgtagagaca
cttattgtgtgggaaaatctggacatcaacagatacgtactgaagaacagtgccactgcg
gagatagttattaagcatttgaacaaggatcaagaagctgatcaaagtaactttagggat
tcggaaacctctgcagaattagaggttcaagaaaagacttcattgttggagtggtttgct
aatgagtaccgaaaatttggatgtacacttgagtttgttaccaacaaatcccaagaaggg
tcccaattttgtagaggttttggaggcattggaggtatcttacgttaccagcttgacatc
aggcagtttgacgagttgtcggacggggaagtatatgaagattcagattag
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