Papaver somniferum (opium poppy): 113350280
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Entry
113350280 CDS
T05758
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113350280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113350280
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113350280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113350280
NCBI-ProteinID:
XP_026450183
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All DBs
Position
2:complement(203553687..203557732)
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AA seq
303 aa
AA seq
DB search
MSSRASRTLYVGNLPGDIREREVDDLFYKYGPIVEIDLKVPPRPPGYAFVEFEDARDAED
AIRGRDGYNFDGHRLRVELAHGGRGQASSVDRRSSYNGGGGGRGGVSRHSDYRVLVSGLP
SSASWQDLKDHMRRAGDVCFSQVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSK
AYIRVKEYDSKRSLSRSRSRSRSDSRSRSPKRSRCKTRSRSKSKSPKPKSSRRSVSRSRS
RSRSVSSRSRSGSKHRSLSRSRSRSKSPVLSPRGKHVSKSPKKRSPSRSKSPIKSKSRSL
SPS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgtgcaagtcgaactctttacgttggtaacttacctggtgatattcgtgaa
agagaagttgatgatttgttttacaagtatggacccattgttgaaatcgatttgaaggtt
ccaccaagacctccaggttatgcttttgttgagtttgaagatgctcgtgatgctgaagat
gctatccgtggtcgcgatggatacaactttgatggtcaccgattgagggtggagcttgca
catggtggaagaggacaagcatcgtcagtggataggcgtagcagttataatggtggtggg
ggtggtcgaggaggtgtatctaggcactcagattaccgtgtcttggtatctggattacct
tcttctgcttcatggcaagatttgaaggatcatatgcgccgagcaggggatgtctgtttc
tcccaagtgtttcgtgagggtggaggcacaactgggattgtggattacacaaactatgac
gacatgaagtatgccatcagaaaactcgatgactctgagttcagaaatgctttctccaaa
gcctacattcgggtcaaggagtatgattccaagaggagcttatcaaggagccgcagccgt
agccgatctgactcgaggagcagaagccccaagcgtagtcgctgcaaaacccgaagcagg
agcaaaagcaaatctccaaagcccaaatcttctcgtcgatctgtatctaggtccagatct
agatccagatctgtttcttcacggtcacgctcgggatcaaagcatcgctcgctctcaaga
tcccgttcgaggtccaagtcgccagtactctctcctcgcggcaaacatgtgagtaaaagc
cctaaaaagcggagtcccagtcgtagcaagagtccaatcaagagcaagagtcgaagcctt
agccctagctaa
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