Papaver somniferum (opium poppy): 113350556
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Entry
113350556 CDS
T05758
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113350556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113350556
03110 Chaperones and folding catalysts [BR:
psom03110
]
113350556
03029 Mitochondrial biogenesis [BR:
psom03029
]
113350556
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113350556
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
113350556
Messenger RNA biogenesis [BR:
psom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
113350556
Chaperones and folding catalysts [BR:
psom03110
]
Heat shock proteins
HSP60 / Chaperonin
113350556
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
113350556
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113350556
Exosomal proteins of other body fluids (saliva and urine)
113350556
Exosomal proteins of breast cancer cells
113350556
Exosomal proteins of colorectal cancer cells
113350556
Exosomal proteins of bladder cancer cells
113350556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Rubella_E2
Motif
Other DBs
NCBI-GeneID:
113350556
NCBI-ProteinID:
XP_026450491
LinkDB
All DBs
Position
2:218156304..218160945
Genome browser
AA seq
572 aa
AA seq
DB search
MYRLASKVASSISSSSSKKLVGSRVLLSRNYAAKDINFGVSARAAMLQGVTQVANAVKVT
MGPKGRNVIIESSFGAPKVTKDGVTVAKSISFQDKAKNLGASLVKQVATATNTTAGDGTT
CATVLTQAILTEGCKSVAAGVNVMDLRHGINMAVNAVIADLKSKALMISTPEEIAQVGTI
SANGEREIGEMLARAMEKVGKEGVITVADGNTMENELEIVEGMKLGRGFISPYFITDEKT
QKCEMDHPLILIHDKKISDMTSLVKILEMAVTKNRPLLIVAEDVESEALTMLILNKHRAG
VKVCAIKSPGFGENRRANLEDLAVLTGGKLITEDQGLKLDKVHIGMLGTAKKVTVSLDDT
IILHGGGDKKLIEERCEQLRTSLENSSSMFDKEKAQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATKAAVEEGILPGGGVALLYSSRVLDNLQTVNNDQKRGVEIIQNALKAP
TFTISENAGVNGAVVIGKLLDQDNVNLGYDAAKGVYVNMVEAGIIDPLKVIRTALVDAAS
VSLLLTTTEASVVESADAKSSTPSRMPQMGDY
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgattagcttcaaaagttgcttcatcaatcagttcttcttcctcaaagaaactg
gttggtagtagagttctgctgagcagaaattatgcagccaaggatattaattttggggtt
agtgctagggcagcgatgctacagggtgttactcaggttgctaatgctgtgaaggtcact
atggggcctaagggtcgtaatgtgattatagagagcagttttggtgctccaaaggttact
aaggatggagtgactgttgccaaaagcatcagttttcaggacaaggctaagaatcttggc
gcatctcttgtaaagcaggttgccactgctacaaatacgactgcaggggatggtacgact
tgtgcaactgttcttacacaggcaattctcaccgaaggctgcaaatcagtggctgctggt
gtcaatgttatggacctacgccatggcatcaatatggcagtcaatgctgttattgctgac
ttgaaaagcaaagcattgatgatcagcacaccagaagaaattgcccaggtgggtaccatt
tccgcaaatggtgaaagggagattggggagatgttagcaagagcaatggagaaagttgga
aaggaaggagttatcaccgttgctgatggtaatactatggaaaatgaattggaaattgtg
gaaggaatgaaactagggagaggattcatctcgccttattttattaccgatgagaagaca
caaaaatgtgaaatggatcatcctctgattcttattcatgacaagaagatatctgacatg
acctcgcttgtcaaaatactggagatggctgttacgaaaaacagaccccttctgattgtg
gctgaggatgtcgaaagtgaggctttgacgatgttaatactcaacaagcatcgtgctgga
gttaaggtttgcgccatcaaatctcctggttttggtgaaaatcgtagagcaaacttggaa
gatcttgcagttctcacaggaggcaagcttatcacagaagatcagggtttaaaacttgac
aaagtacatattggaatgcttggtactgcaaaaaaggtcaccgtttcccttgacgacacc
attattctacatggtggtggcgacaagaaacttattgaagaaagatgcgagcagcttagg
acatcgctggagaatagcagctccatgtttgacaaggagaaggcacaagagcggttgtca
aagctgtcaggaggtgttgctgtcttcaaggttggaggagctagcgaagcagaagtcgga
gagagaaaagacagggtcacagatgctctgaatgctacaaaagctgccgtggaagagggt
attcttccaggtggtggtgtcgctcttttgtactcttctagagtgttggataaccttcaa
actgtaaacaacgaccaaaaaagaggtgtggagataatccagaatgcattgaaggcacct
acatttacaatatctgaaaatgctggtgttaacggtgccgtagttattggcaaactattg
gatcaagacaatgtcaatctaggttacgatgctgccaagggtgtgtatgtcaatatggtg
gaggccggaattattgatcctctcaaagttatcagaacagccttagtagatgctgccagt
gtgtcgctactattgacaacaacagaagcgtcagttgtagagagtgctgatgcgaaaagc
tcaacgccaagtcgaatgccacaaatgggtgactactaa
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