Papaver somniferum (opium poppy): 113351590
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Entry
113351590 CDS
T05758
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Module
psom_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113351590
Enzymes [BR:
psom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113351590
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
113351590
NCBI-ProteinID:
XP_026451328
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Position
2:complement(89648294..89653831)
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AA seq
416 aa
AA seq
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MEMVLMVMDMKLYCIVLELVLLILNPNWSSKFCSIKPPVVDISIDVYDVVVQGGAVGDGV
TDDSKAFQNVWTKVCRANSEFPDFVIPSGKSFLLSPITFKGPCRSPKLVIQVLGNIVAPN
QISAWGNDSKHSWVDFSHIDGLTIHGPGLIDGQGLTWWNQSHVEERPTALKLDSCNRVKL
SGLKHINSPRNHISIHNCTNVIVSNINITAPGTSHNTDGIDISWSTHIQIQDSFIGTGDD
CIAINGGTSFVDIINLACGPGHGISVGSLGAKGATEIVENIHVENCTFTGTQNGVRIKTW
QGGSGHARRIMFDQIKFVEVENPIVIDQYYCNAKHNCKNHTSAVEVSDVYYNRIYGTSKH
HKNVINLRCSQDVPCTNIIMNQINIQSMDPHKNSTSFSYNAYGISNDTTPAVTLIS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggttctaatggtaatggacatgaagttatattgtatagttttggaattagta
ttacttattctaaacccaaactggagtagcaaattttgttccataaaaccaccggtggtc
gacatatcaattgatgtgtatgatgttgttgtccaaggtggagcggttggagatggagtc
accgacgattctaaggcattccaaaatgtgtggacgaaagtttgtcgagcaaattcagaa
tttccagattttgttataccctctggaaagagtttcctattgagccctataacattcaaa
ggtccctgcaggtctccaaagcttgttatacaggttttgggtaatattgttgcaccaaac
caaatttcagcatggggtaatgattcaaaacatagctgggttgatttttctcatatagat
gggctgacaatccatggacctggtctgattgatgggcaaggactcacttggtggaaccaa
tctcatgtagaagagcgtccaactgccttaaaactggattcatgcaacagagtgaaatta
agcggactgaaacatataaatagtccaagaaatcatatctcaatacataattgtaccaac
gtaatcgtctccaacatcaatataactgctcctggaaccagccataatacggatggaatt
gatattagttggtcgacacacattcaaatccaagattctttcatcggaaccggtgatgat
tgcatagcaattaatggtggaacttcctttgtagatatcattaatctggcatgtggacca
ggccatggcataagtgtgggaagcttgggagccaaaggagcaactgaaattgtggaaaat
atacacgtcgaaaactgtacattcacagggactcaaaatggagtgagaatcaagacatgg
caggggggctcaggccatgcaaggcgtatcatgttcgatcaaattaaatttgtagaagtg
gagaatccaattgttatcgatcaatactattgtaatgctaaacacaattgcaagaatcac
acatctgctgttgaagttagtgatgtttactacaataggatttatggaacttcgaaacat
cacaaaaatgttatcaacctgagatgcagccaggatgtcccttgcactaacataatcatg
aaccaaatcaacatccaatcaatggatccacataaaaacagcacttcgttcagctacaat
gcttacggaatatctaatgatacaacaccggctgtaacactcatatcttaa
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