Papaver somniferum (opium poppy): 113351639
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Entry
113351639 CDS
T05758
Name
(RefSeq) cleavage stimulation factor subunit 77-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113351639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113351639
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
113351639
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
TPR_15
NatA_aux_su
TPR_Slam
TPR_CcmH_CycH
DUF6377
PRTRC_E
Motif
Other DBs
NCBI-GeneID:
113351639
NCBI-ProteinID:
XP_026451370
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Position
2:complement(95235317..95237494)
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AA seq
725 aa
AA seq
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MVDKYNVEATEILAYHALSLPMTEAVPIYEQLLSTFPTAAKYWKQYVEVHMMLHNDVAAK
QVFGRCLLDNRQVSLWRCYIRLIRKLNEYKGAEGQEETKKAFEFMLNYLGSDIASGLVWI
EYITFLKSLPASDPQEESQRTASIRKVYQKAVTTPTHHVEQLWKDYEKFENSVSRALAKS
QVSEYQPKYNSAKAVYRERKKLVDDIDWNMLAVPPTGSDKEEQQCMAWKRFLAFEKRNPQ
RIDSESSNSRIILSYEQCLMYLYYYPDVWYDYVTWHADNGSMDLAVKIYEKALKVLPDSE
LLKYAYAELEESRGEIQPAKKIYESLIGDGVNASALAHIQFIRFLRRTEGIEAARKYFVD
ARSYPNCTYHVFVAYAKMAFCQDKDPKLAHNVFEAGMKRFMHEPEYILEYADFLCRLNDD
TNVRALFERALNTLPPEKSVEIWKRYTQFEQTYGNLASILKVEQRRKEALSRTGEDGSSA
LHDVVSRYSFMGLRPCSSKDLDYLARQELLAKNINQKAEKSVLPTSAKVNYPDTSRMIIY
DSRQLQDAALLPNNAELPAASNSILPAPAAPSVVGTGTTKSLDEILGVLPPALAAFVRNL
PSVDGPAPDVDIVLSILLQSNVPSVKTGKLAPVPITSDSANKSRLNPGAVPFKSAKQVHS
GGKRKDMDRQQNDETPAQSQPVPTDLFKIRQMKKARGVTSSQTGSASSGSGSSFSGELSG
SIGCT
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggttgataagtataatgttgaagccacggaaattctggcatatcacgctctgagtttg
ccaatgactgaagcggtgccaatatatgagcaacttctctcaacgtttccaacagctgct
aagtattggaagcagtatgtggaagtacacatgatgctacataatgatgttgcagctaaa
caggtcttcggtcgttgtttattagataaccggcaagtttctctatggcgttgttatatt
cgtttaataaggaaattgaatgaatacaagggtgcagagggacaggaagaaaccaagaaa
gcttttgagtttatgcttaattatcttggttctgatattgcatctggactagtatggata
gagtatattacatttttgaagtcattgccggcttcggatccacaggaagagtctcagcgt
acggcttcgataaggaaggtgtaccaaaaagctgtaactacacctactcatcatgtggaa
cagctatggaaggattatgagaaatttgagaactctgttagccgtgcattagcaaaaagt
caggtgtctgaataccaaccgaagtacaacagtgccaaggccgtctatagagagcgaaag
aaattggttgatgacattgattggaatatgcttgctgtacctccaactggatctgacaag
gaagagcagcaatgcatggcgtggaaaaggtttctggcctttgaaaaacggaacccgcag
aggatagatagtgaatcttctaacagtcgaattatcctcagctacgagcagtgtctaatg
tatttatattattatccggacgtatggtatgactatgttacatggcatgcagataatggt
tctatggatcttgcagtcaaaatttatgaaaaggctttgaaggttctacctgattctgaa
ttgctgaaatatgcctatgcggaactggaggaatctcgtggtgaaattcagcctgcgaag
aaaatttatgagagccttataggggatggggtgaatgcaagtgcactggcacacatacaa
tttatccgctttctgagaagaactgaaggaattgaagcagctcgcaaatacttcgtagat
gctcgtagttatccaaactgcacgtatcatgtgtttgttgcttatgcaaagatggcattt
tgtcaggacaaagatccaaagttggctcacaatgtctttgaagctggtatgaaaagattt
atgcatgagcctgaatacattctcgagtatgcagatttcttgtgccgtttaaatgatgat
accaatgtccgtgctttgtttgagagggccttgaacacgctcccaccagagaaatctgta
gagatctggaagcggtatacccagtttgagcaaacatatggcaatctggctagtattctg
aaagtagagcaaaggaggaaagaagctctttctagaacaggggaagacggatcctccgca
ttacatgatgttgtgtcaaggtacagttttatgggtctccggccgtgctcctctaaagac
ctggattatttggcgcgtcaagagttgcttgcgaaaaacattaaccagaaggccgaaaag
tcggttctaccaacatctgctaaagttaattacccagatacttcccggatgattatttat
gactctcggcaactgcaagatgctgcattacttcctaacaatgcagaactcccagctgct
tcaaactccatactacctgctcctgctgcaccttcagttgtggggactgggacaacaaaa
tcacttgatgaaattttgggagtgcttcctccagctttggcagcatttgtcagaaacttg
ccctctgttgatgggcctgcaccggacgtggacatagtcttatcgatattactgcagagt
aatgttccttcggtaaagacagggaaattagcccctgttcccatcacgagtgatagtgca
aacaagtcacggctcaacccaggtgccgtgcctttcaaatcagctaaacaagtccattca
ggggggaagagaaaagacatggacaggcaacaaaatgatgaaaccccagcccagagccaa
ccagttccaacagatcttttcaagattagacaaatgaagaaagctcgaggagtaaccagt
tcacaaactggatccgcatccagtggtagtggaagttcgttctcaggagagctgtcaggc
agtattggatgtacttaa
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