Papaver somniferum (opium poppy): 113354307
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Entry
113354307 CDS
T05758
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113354307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113354307
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113354307
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
MPM1
Polyketide_cyc2
Motif
Other DBs
NCBI-GeneID:
113354307
NCBI-ProteinID:
XP_026453459
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All DBs
Position
2:complement(184609981..184612503)
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AA seq
261 aa
AA seq
DB search
MDSSYRQTCLRLEIPGRENEQQEVIFIKGNWFDSRFELFITDGINTWICKALESEVKGRA
SQWDQPVSDYIETAERHLGFRQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRWKCKPSP
DNKKTTSEILDFLMDANIRLSEEVVRKAQSFDRLKLEAEKCLAQSEKFSNEKAELESALY
AKFVGVLNSKKAKLRELRDRLSKQEHSGKSPQEEEESSGKTESYHEPTDQEDNSGVESSK
SDVGTSKNISTSTRYSRKRKT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggattccagttacaggcaaacatgtttacgacttgaaattcccggcagagaaaatgaa
caacaagaagtaattttcatcaaagggaactggtttgattctcgttttgaacttttcatt
accgacggaatcaacacttggatatgcaaagctttggaaagtgaagtcaaagggagagca
agtcaatgggatcaacctgtgtctgattacattgagactgctgaacgtcatctagggttt
cgacaacctggttctacatatggttttgttgatgctggtgatggacataagagattgtcg
tggacatttgagaagcaaggaacaacgttagaatggcgatggaaatgtaaaccatcacct
gataacaaaaagacgacttcagaaattctggattttcttatggatgcaaatatacgcctc
agtgaagaagtcgttagaaaggcgcagtcatttgacaggttgaaactggaagctgaaaaa
tgcttagcccagagtgagaagttcagcaatgagaaggcagagcttgaatcagctctgtat
gcaaagtttgttggtgtcttaaactcaaaaaaggcaaaactgagagaactgcgagaccga
ctatcgaagcaggaacacagtggcaaatcacctcaggaagaagaggagtcatccggtaaa
actgaatcttatcatgaaccaactgatcaagaagataacagtggtgtagaatcctcaaag
agtgacgttgggacgtcaaagaacataagtacaagtacgcgctacagtcgaaagagaaaa
acatag
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integrated database retrieval system
