Papaver somniferum (opium poppy): 113354355
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Entry
113354355 CDS
T05758
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113354355
09123 Folding, sorting and degradation
03018 RNA degradation
113354355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113354355
03041 Spliceosome [BR:
psom03041
]
113354355
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113354355
mRNA degradation factors
5'-3' decay
Lsm complex
113354355
Spliceosome [BR:
psom03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113354355
Complex C
U2 snRNP components
113354355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
Motif
Other DBs
NCBI-GeneID:
113354355
NCBI-ProteinID:
XP_026453489
LinkDB
All DBs
Position
2:197330971..197333016
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AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDVELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttttcgtattttaaggatttagtaggaagagaagtgacagtggaattaaag
aatgatcttgcaataagaggaactttacattcagtagatcaataccttaacataaagctt
gagaatactagagtagttgatcaagacaagtatcctcacatgctttctgtaagaaactgc
tttatcaggggatcagtggtgaggtatgtgcaattgcccccagatggagttgatgttgaa
cttctacatgatgctacaaggagggaggctcgtggtggctga
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