KEGG   Papaver somniferum (opium poppy): 113354355
Entry
113354355         CDS       T05758                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03018  RNA degradation
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113354355
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113354355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113354355
   03041 Spliceosome [BR:psom03041]
    113354355
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113354355
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     113354355
Spliceosome [BR:psom03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    113354355
 Complex C
  U2 snRNP components
    113354355
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C
Other DBs
NCBI-GeneID: 113354355
NCBI-ProteinID: XP_026453489
LinkDB
Position
2:197330971..197333016
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDVELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttttcgtattttaaggatttagtaggaagagaagtgacagtggaattaaag
aatgatcttgcaataagaggaactttacattcagtagatcaataccttaacataaagctt
gagaatactagagtagttgatcaagacaagtatcctcacatgctttctgtaagaaactgc
tttatcaggggatcagtggtgaggtatgtgcaattgcccccagatggagttgatgttgaa
cttctacatgatgctacaaggagggaggctcgtggtggctga

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