Papaver somniferum (opium poppy): 113355326
Help
Entry
113355326 CDS
T05758
Name
(RefSeq) LOW QUALITY PROTEIN: BRCT domain-containing protein At4g02110-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113355326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psom03032
]
113355326
03400 DNA repair and recombination proteins [BR:
psom03400
]
113355326
DNA replication proteins [BR:
psom03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
113355326
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
113355326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
CSDE1
Motif
Other DBs
NCBI-GeneID:
113355326
NCBI-ProteinID:
XP_026453941
LinkDB
All DBs
Position
3:12707819..12711453
Genome browser
AA seq
759 aa
AA seq
DB search
MGEDYSTYGGGGGSQPGTFNGVRFILVGFNPSEENEVEIKLISGGGVNVGQYGSNCTHVI
VDKIVYDDDCCVTARKDGKPVVNSAWVDHSFHAGMPVNSSLILYRPVKDLNGIAAANSFV
VCLTGYQTQTRENIMRMVCMMGAKFSKSLVGNTVTHLICYRFEGDKYKLAKQINRIKLVN
YRWLQDCLKAWEILPESNYYESGHEIEMMEAEVKDSEDETEEYRDTEQLGVRNDTDSSSK
LQAGRGMSTSKGSDLTMPVRKRFDINQQTSAAKDLLHATENTTSKTSIKGLRVGDSAESS
SKHQYSGKQAKRKDGDLLTSKADQAKEVVGGVINEERTNMVEAKRRLCHASKACESKTEM
PFDDEKERKSVEKWSSVESGEHDKENVVPKPNTKHKQSDIRQNLILTXIVQTGWDSKPLN
SQPMCFILSGKRLQREEFQKIIRNLKGRCCRDSHKWSDEATHFIPPVQVRRTEKFFAAAA
SGRWILKMDYLTACNQAGKFVGPETGLNEEATISLDAPRKWRQLRERTSHGAFYGMQIVT
YRKSFVPSLDTLECVMKAGGGAILATSPPYTKFLGSGIDFAVITQGMPRDDMWVLEFLNH
KIPCVLVDYLVEYICRPDYARDDHVLYDTIEWADKSLANHETRIGMRVESKKNWANLEME
GMNSTDLICNNNKEEKQLPFNTSEVANKTPLEKGDGIHTRVCNYPRNYSEETTDKDDDEG
ALLRRVRAKYFQAKEEFYAKEKIYLAVEFFIRYIDVLNL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagattactcaacttatggaggaggaggaggtagtcaaccgggaacattcaat
ggagttcgattcatacttgttggattcaatccatcagaagaaaatgaagtagaaatcaaa
cttattagtggaggcggagtgaatgtcggtcaatatggttctaattgtactcatgttatt
gttgacaaaattgtttatgatgatgattgttgtgttaccgcgagaaaggatgggaaaccg
gtggttaattcggcgtgggtggatcatagtttccatgctgggatgcccgtaaattctagc
ttgattttgtatagaccagttaaggatttgaatggaattgcggctgcaaattcatttgtt
gtatgtctgacaggataccaaacacaaactcgtgaaaatataatgaggatggtatgcatg
atgggagcaaaattttccaagtccttggtaggaaacacagtcactcatctcatatgctac
agattcgagggtgataagtataagcttgcaaagcaaataaatagaataaagcttgtcaac
tatcgatggttgcaggactgtttaaaagcatgggaaatacttccagaatctaactactat
gagagtggtcatgaaatagagatgatggaggctgaagttaaagattctgaagatgaaact
gaagaatatagagatacagaacagctgggagtgagaaatgatactgacagttcatctaag
ttgcaagctggaaggggtatgtcaacttcaaaggggtctgacttgaccatgccagtaaga
aaaaggtttgatatcaaccagcagacatccgcagctaaagacttgttacatgccaccgag
aacacgacttcaaaaaccagtataaagggattaagggtgggagattctgcagagagttca
tctaagcatcagtattcaggaaaacaagctaaaagaaaagatggggatctgttgacttcc
aaagcagatcaagcgaaggaagtggtgggaggagtgatcaatgaggagaggacaaacatg
gttgaagcaaaaaggaggttatgtcatgcaagcaaagcatgcgagagtaagacagagatg
ccatttgatgatgagaaagagagaaagtcagttgaaaaatggtccagtgtcgagtcagga
gaacatgataaggaaaatgttgttcctaaacctaatactaagcacaagcagagtgatata
aggcaaaatctaatactgacttagatagttcagacaggctgggattcgaagcccttaaac
tctcaacctatgtgctttatacttagtgggaaacgtctacagagagaggagtttcagaaa
attattaggaatttgaaaggacgatgctgcagagattctcacaaatggtcagatgaagct
actcactttatccccccagttcaagttagaagaacagagaaattctttgctgctgcagca
tcaggcaggtggatattaaagatggattacttaactgcttgtaaccaggcaggaaagttt
gtggggcctgaaactggacttaatgaggaggctacaattagcttagacgctcctaggaag
tggcgtcagttaagagaaaggacgagtcatggtgctttttatggaatgcaaattgttact
tacagaaaaagctttgttccatcattggatactttagaatgtgtgatgaaagcaggcggt
ggtgccattctagcaacttcccctccttacaccaagttcctcggatcaggaattgatttc
gcggttataactcaaggaatgccaagagatgatatgtgggttctagaattcctaaaccac
aagatcccatgtgtcttggttgattacttggttgagtacatatgcagacctgattatgca
cgtgatgatcatgttctctacgacacgatagaatgggcagataagtcactagcaaaccac
gaaacgcgaataggaatgagagtggagtcgaagaaaaattgggcaaatcttgaaatggag
ggcatgaactctacggatctgatttgcaacaataacaaggaggagaaacaactgccattt
aacacttccgaagttgcaaacaagacgcctctagaaaaaggtgatggcattcatactaga
gtttgtaattatcctagaaattattctgaagaaacaacagacaaggatgatgatgagggt
gctcttcttagacgagtaagagccaaatattttcaagctaaagaagagttctatgctaag
gagaagatatacctggcagtcgagttctttattagatatatagatgttttgaacttgtaa
DBGET
integrated database retrieval system
