Papaver somniferum (opium poppy): 113355770
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Entry
113355770 CDS
T05758
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113355770
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
113355770
microRNA pathway
RISC loading complex
113355770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
Dicer_dimer
Helicase_C
ResIII
PAZ
dsrm
Cas3-like_C_2
Adeno_E3B
AAA_22
Motif
Other DBs
NCBI-GeneID:
113355770
NCBI-ProteinID:
XP_026454504
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All DBs
Position
3:32614763..32622620
Genome browser
AA seq
1451 aa
AA seq
DB search
MGEKNNVVIVISDDEEEEDNAAAEPITKHRRVLNPEPQQPHLQPHGGDDENPQSFARNYQ
LEALEKAMRENTIVFLETGSGKTLIAIMLLRNYSYLLGKRLSSSSQHHYISVFLVPTVVL
VTQQARAVERHTDLKVGKLWGDLGVDFWDAATWKKEIQKHELLVMTPQILLDALRHSFLK
LDVIKLLIFDECHHARGKHAYACIMTEFYHPLLHTQSNLVPRIFGMTASLINTKGSSSIN
YGKQILELERLMNSKVYTVSHESNLAAYVPFATTKLRFYEHVDMPYALSFTLASSLEQAK
FKIVNSLKELQLDEKAEESALKKVSKLFGTFKYCLTDLGVWLAHKAADSLSCVETNHFFW
ESNTDGNVERVMRTFSGDVFRAFSPHVLSDRKIGDSLTEDMDAGLLSAKVKCLIESLTAY
RHIKALRCIIFVERVITSVVLQSLLNEVSELSCWKTAYMARNQSGLQIQSRKKQDAIIDD
FRKGIVNIIVATQILEEGLDVQSCNLVIRFDPSATICSFIQSRGRARKHGSDYVLVLKSG
DASTLSKVIGHLAGGEIMREESIRYASLPCAPCEHEMEDNDFYRVEKTGALVTLNSSVAL
VYYYCSHLPSDGYFRPAPRFFFDKDVYYTLHLPMSSPIQTVSVQGQKNMVKNIVCLEACR
KLHNIGALTDNLLPESVVEEAAAQEFGSVPYEDKVVDYFPAQLVSHCESSSKEVYHFYSI
GLKQNFEYDVPLRDIILLMKCDSKSDFEDLDFQLAVRRGFVGVKIVHSGTIYLTSSQVLT
AKKFQLTLLRFLLDHNLEKLKDVMDKKGTNPVIHYLLLPSVDCGQKESPLIDWDCVRSSL
FQSPLVPWSGNVQGDISKLHSCSANGCVCCLHTKDGVVGRSILENSLVFTPHNGKIYGIT
RILDDMDGNSVMDKRQVETVTYKKHFRTQYGVNLCYAKEPLLRGRQIFTVHNWLLRHKEF
KEKEISKAWVELPSELCAIIMSPITIGTLYAFSLVPSIMHRVESILLARSLKKIHLDHFP
NQYVVPTMKVLEAITTKKCQEEFSLESLETLGDSFLKYAVSRHLFRSNKNQHEGLLTIKK
GRMISNEVLCMLGCDRKLQGFIRNVCFNPKEWAIPDEPTCCITLDETVISAEKIYIKGTR
YMRSKVVADVVEALIGVYLSSCGEMAALQFIDWLGLKVAFFSEHDQLHNETTIPLIHPER
HVNISHLESVLNYSFRDPSLLVEALTHGSYHLSDVPRCYQRLEFLGDAVLDYLITVYMYD
KYPGMSPGLLTDLRSASVNNDCYAHAAVKAGLHKHILHASSKLHKQIGIFVGSYDQSSSE
STFGWGSEGDLPKVLGDIIESLAGAILVDSHYDKDVVWASIKHLLEPLVTPETVKLHPVR
ELQELCQRNNFVCERSVSFDKGIASLTIQVKGERMSYCHTCTGANKKMAKKLASKAVLDY
LKGQSTPVVVQ
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaaaaataatgtggtgatcgttataagcgatgatgaggaagaagaagataat
gcagcagcagagcctataactaagcatcggagggtattaaatccggagccccagcaaccc
catctccagcctcatggtggtgatgatgaaaatcctcagtcttttgctagaaattatcaa
ttagaagcattagagaaagcaatgagggagaacacgattgtatttctagagactggttca
gggaaaactttgattgcgattatgttgcttcgcaattactcttaccttctcggaaaacgc
ttatcatcgtcgtctcaacatcactatatctctgtgttcttagtccctacagttgtattg
gtcacacaacaagcaagggctgtggagcggcacactgacttgaaagtgggtaaactttgg
ggagacttgggggtggatttttgggacgctgccacatggaagaaagagattcagaaacat
gagttgcttgtgatgacaccccagattttacttgatgctctgcgtcatagctttctgaag
ctagatgtaattaagctattgatattcgatgaatgtcatcacgcaagagggaaacacgcc
tatgcttgtatcatgactgaattctaccatccgcttctgcatacacagtccaatctggtt
cctagaatttttggaatgactgcctcccttatcaataccaaaggatcaagctccattaac
tatgggaaacaaatacttgaactcgagcgtcttatgaactcaaaggtttacactgtttct
catgagtccaatttggctgcgtatgtaccatttgctactacaaaactgaggttttatgaa
catgtggatatgccatatgcgctgtctttcacacttgccagtagcttggagcaagcaaag
ttcaagattgtaaattctctgaaagagttacaacttgacgagaaagcggaagagtctgcg
ttaaagaaggtttcaaaattatttggaactttcaagtactgtttaacagatcttggtgtt
tggctggctcacaaggctgctgattcactgtcttgtgtagaaactaatcattttttctgg
gagagtaacacagatgggaacgttgagagagttatgagaactttcagtggagatgtgttt
cgggccttttcaccccacgtgctgtctgataggaaaattggtgatagtctgactgaagat
atggatgctggcttgttgtctgctaaagttaaatgtcttattgaatcactaactgcgtac
agacacattaaagcattaagatgcataatattcgtcgagagggttataacatccgtagtt
cttcagtctctactgaatgaagtgtcagaattgagttgctggaaaacagcttacatggct
cggaatcagtcagggttgcaaattcagagtaggaaaaaacaggatgcaatcattgatgac
tttcgtaaaggcattgtgaacatcattgttgccacccagatacttgaggagggtcttgat
gttcagagttgcaacttggtcataagatttgacccatcagcgaccatttgcagcttcata
cagtcgcgcgggcgtgcaagaaagcatgggtcagactatgtattagttctaaagagtggg
gatgcttcaaccctttctaaagtaataggccatctagcaggtggagaaattatgagagag
gagtctatacgctatgcctccttgccatgtgcaccttgtgaacatgaaatggaagacaac
gatttttaccgtgttgaaaaaactggagcacttgttactctgaactctagtgttgcattg
gtatactattattgctctcatctgccttcagatgggtattttagaccggctcccaggttc
tttttcgacaaggatgtttattacactctacatcttccaatgagttccccaatacaaacg
gtttctgttcaaggtcaaaagaatatggtaaaaaacattgtgtgccttgaagcatgcagg
aagctacataacattggggctctgactgataaccttttaccagaatcagttgtggaggaa
gctgcagctcaagaatttggatctgtaccttatgaggataaggtagttgattattttcct
gcccaattggtcagccattgtgaatcctcttctaaggaggtgtatcatttttattcaatt
ggcttaaagcaaaattttgaatatgatgttcccttgagagatattattctcctcatgaag
tgcgattctaaatctgattttgaggatttagattttcaattagctgttcgtaggggtttc
gtcggagtgaaaatagtgcactctggtactatttatctcacctcaagtcaggttcttacg
gctaaaaagttccaactcactctacttaggtttcttttggatcacaatttggaaaaattg
aaagatgtaatggacaaaaagggtaccaacccagtgattcactatttacttctgccatca
gttgattgtggccagaaagaatctccattaattgattgggattgtgttagatcttcactt
ttccaatccccactcgttccgtggagtggaaatgttcagggtgatatcagcaaactgcat
agttgctctgctaatggttgtgtttgttgtttgcatacaaaggatggtgttgttggcaga
tccattctagagaactcattagtatttactccccacaatgggaaaatatacggcattaca
cgtatcttggatgacatggatggaaactctgttatggataagcggcaggttgaaactgtt
acatacaagaagcatttcagaacccagtatggtgtcaacttgtgttatgctaaggaacca
ctactccgtgggagacagatttttacagtacataattggcttctaaggcataaagaattc
aaggagaaagaaatcagtaaagcttgggttgaattgccatctgagctttgtgctattatt
atgtctccaataaccattggtaccctgtatgcattctccttggttccttccattatgcat
cgagtcgagtctatacttcttgctcgtagcctaaaaaaaatacacttggatcacttccca
aatcagtatgttgtcccaaccatgaaggttctggaagcaattacaacaaagaagtgtcaa
gaggaattttctttggaatcactagagactctaggagactcttttctcaagtacgctgtt
agtcgacacttgttcagatcaaataagaatcaacatgagggacttctcacaatcaagaaa
ggaagaatgatatccaatgaagtcctttgcatgctgggatgtgaccgcaaacttcaggga
tttattcggaacgtatgttttaatcctaaggagtgggcaattcccgatgagcctacttgc
tgtatcacgttggatgaaactgttatttctgcagaaaagatatacattaagggaacaagg
tatatgaggagtaaagtagttgctgatgtcgttgaagctctaattggagtatatctcagc
tcatgcggtgagatggcagctttacaatttatagattggctggggctgaaggttgcgttc
ttctctgagcatgatcagctacataatgagactacaataccgttgattcatccggagagg
catgttaatataagccatcttgaatctgttctgaattactcgttcagagacccttcttta
ctggttgaagcgctaacccatggttcataccatctctcggacgttcctagatgctatcag
cgtttagaattccttggtgatgctgttttggattacctgatcactgtatacatgtatgat
aaataccctggaatgtccccgggattgttaactgaccttagatcagcatcagtaaacaat
gactgttatgcacatgctgcagtaaaggctggcttgcataagcatattctgcacgcatcc
tctaagcttcacaaacaaataggaatatttgttggtagttatgatcaatcatcatccgag
tcaacttttggatggggttccgagggtgatttaccaaaggtgcttggagatattattgaa
tccttggcaggggcaattctggtcgattcccattatgacaaggatgtcgtgtgggcaagc
ataaaacacctactggaacctctggttacgccagagacagtgaagctgcatccagtgagg
gagctacaggaattgtgccaaagaaataattttgtctgtgaacgtagtgtatcatttgac
aagggcattgcttctcttactatacaagtgaagggagaaagaatgtcatactgccatacc
tgcacaggtgcaaataagaagatggcgaaaaaactggcttccaaagctgtgttggactac
ttgaaaggccaatcaactccagttgttgtacagtaa
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