Papaver somniferum (opium poppy): 113356085
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Entry
113356085 CDS
T05758
Name
(RefSeq) DNA mismatch repair protein MLH1-like isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03430
Mismatch repair
psom03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113356085
03460 Fanconi anemia pathway
113356085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113356085
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113356085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113356085
NCBI-ProteinID:
XP_026454877
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Position
3:complement(47654522..47661575)
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AA seq
726 aa
AA seq
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MEIEEEHEQTLMTHTKEPPKIHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDASSTFI
NVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSVFEDLQSIKSMGFRGEALASM
TYVAHVTVTTITSGQLHGYRVSYKDGVMESEPKPCAAVKGTQMMIENLFYNMTARRKTLQ
NSADDYAKIVDLICRFGVHHTNVSFSCRKHGATRADVHTVATPSRLDAIRSIYGVSVAHN
LMEVTASDDDQSGSVFKMHGYISNSNYSAKKITMVLFINDRLVDCTSLKRAIEVVYAATL
PKASKPFIYMSIVLPPEHVDINIHPTKREVSLLNQETIIEKIQMAVESKIRNTNSARTFH
TQTAEPSQSVPLSSSKEANYQSPSASKQEKVPEHKMVRTDITDPVGRMHAYLQDAPLSQH
ERKSGLNTIRSAVRHRRNPRETADLTSVQQLLSEVDNNCHSGLLDIVKQSTYVGMADNVL
ALLQHNTHLYLVNVVNLSKELMYQQVLRRFAHFNAIQLSEPAPLSELMMIALKEEDMESK
TDEVMKQKIAEMNVELLKQKIEMLQDYFGILIDQRGNLSRLPVILDQYTPSMDHLPEFVL
SLGNDVDWEDEQNCMQAISASLANFYALHPPLLPNPSGEGRQFYKNRTQTGNGEENVNDP
RESEDNLDLELISEAETAWAQREWSIQHVLFPSLRLFLKPPKLMATNGTFVQVASLEKLY
KIFERC
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaagaagaacatgaacaaaccctaatgacccacacaaaagaaccaccaaag
atccacagactcgaagaatcagtagttaacagaatcgcagctggtgaggtcatacaacgc
cccgtttccgctgttaaagagctcgtcgagaacagtcttgacgcttcttcaactttcatc
aatgttgttgtcaaagatggtggactcaagcttatccaagtctctgatgatggccatggt
atccgctatgaagacttgccaattctgtgtgaaagacacacaacatcgaaactatctgtt
tttgaagacttgcagagtataaaatcaatggggtttagaggtgaagcattagctagtatg
acttatgttgctcatgttacagttactaccatcaccagtggtcaattacatggttatagg
gtttcttataaagatggtgtcatggagagtgaacctaagccttgtgctgctgtgaaagga
actcaaatgatgattgaaaatctcttttacaatatgacggctcgaaggaagacacttcag
aactctgctgatgattatgctaagatagtggacctaatttgtaggtttggagtacatcac
actaatgtgagcttctcatgtagaaagcatggtgctaccagagctgatgttcacacggtg
gctacaccatcaagacttgatgcaatcagatcgatctacggtgtctcagttgcccataat
ctcatggaagttacggcttcggatgatgatcagtctggctcagttttcaagatgcatggt
tacatctcaaattcaaattacagcgccaagaaaattactatggtgctttttataaatgat
aggttggttgattgcacttccttgaagagagcaattgaagttgtttatgctgcaaccctg
ccaaaggcatctaaaccgttcatatatatgtcaattgtactgcctcctgagcatgtggat
attaatattcatccaacaaagagagaggtaagccttttgaaccaggaaacgattattgag
aaaatacaaatggcagtggaatcaaaaataaggaacactaattcagcaaggacatttcac
acacagactgcagaaccttctcaatctgttcctctgagctcaagcaaggaagccaattat
caatcaccctctgcctctaaacaggaaaaagttccagagcataaaatggtccgtactgat
attacggatcctgttggaagaatgcatgcctacttgcaagatgcacctctgagtcagcat
gaacggaaatctggcttgaacacaatacgctctgcagtgaggcatagaagaaatcctagg
gaaactgcagatctgactagcgtccagcagctcttaagcgaggttgataataactgtcat
tctggtttgctggacatcgtcaagcaatcgacatatgttggaatggcagataatgtcctg
gctttgcttcaacacaacacccacctgtatcttgttaatgtagtgaatttgagcaaagag
ctcatgtatcagcaagttctacgtcgattcgcccatttcaatgctattcaacttagtgag
cccgcccccctttcagaattaatgatgattgcattgaaagaagaagatatggaatccaaa
actgatgaagtgatgaagcagaagatagcagaaatgaatgttgagctgctgaagcaaaaa
attgagatgttgcaggattattttggcattctcatcgatcaacgagggaacttatctagg
cttcctgttatactggatcaatacacacctagcatggatcatcttccagaatttgtgttg
tcattgggcaatgatgtggattgggaagatgaacaaaattgtatgcaagcaatttcagcc
tctctagcaaacttctatgctttgcatcctcctctcctgcccaacccatctggggagggg
cggcaattttacaagaacaggacacagactggcaatggtgaagagaatgtaaatgatccc
agagaatcagaggacaaccttgatcttgaattgatatcagaagctgagactgcatgggct
caacgagaatggtccatccaacatgtcttgttcccttccctaagactatttctgaagccc
ccgaagttgatggctaccaatggaacatttgttcaggtggcttcattggagaagctctac
aaaatctttgaaagatgctag
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