Papaver somniferum (opium poppy): 113356179
Help
Entry
113356179 CDS
T05758
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113356179
03015 mRNA surveillance pathway
113356179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113356179
03041 Spliceosome [BR:
psom03041
]
113356179
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113356179
Spliceosome [BR:
psom03041
]
Complex C
Other components
EJC/TREX
113356179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
113356179
NCBI-ProteinID:
XP_026455016
LinkDB
All DBs
Position
3:complement(54520958..54525179)
Genome browser
AA seq
408 aa
AA seq
DB search
MGSNEIEKTEENLRKEIEELQRQQWEITERLRDPRGIRRGGLASNGPRNFNSNGAGNRHQ
QRGFVRPGGPIDPEDQSAPKRRLLSAVVKVDDGEEVKGKEVAADSDAMDTNVKESDGTAA
VNESREQQHGGENTRRDAHRGVRKDFNGISEEHVPRVLPKNEDPSLVNRNKRMLGNLLGT
LEKFRKEDKQLSTTDAFMRRSSSLQRAEQRAREESEKLRVQEREQIAEKRRRDLTLRARV
AAKAEEKKLELLFLHWTEHHKKLNNFLRTKAEPPIFYLPTKPLVEDETLAAEQKEQAFLN
WKNARREELSEYQKQIGEQCLANVETELDRWQNGRNARKGNNNLMNLQETMDKELETRQL
EYGPKTTRKIPEEGAGDDEDVEDINVGEDDIIEDVLEEVEDDKRIDAA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcaacgaaattgagaaaactgaagaaaatcttcgtaaagaaattgaagaactt
caacgtcaacaatgggagattactgaacgtcttcgagatcctagaggtattcgtcgaggt
gggttggcatcaaacggcccccgaaatttcaactctaatggtgccggaaatcgtcaccaa
caaaggggatttgttagacctggtggtcctattgatcccgaagatcaatcagcaccgaaa
agacgtcttttatcagctgttgttaaggtagatgatggagaagaagttaaagggaaggaa
gtggctgctgatagtgatgcgatggatacgaatgtgaaggaaagtgatggaacggcggcg
gtgaatgaatcacgtgaacaacaacatggtggtgaaaatactaggagagatgcccataga
ggggttaggaaggatttcaatggcatatcagaagagcatgttccgagggttttgccgaag
aatgaggacccaagcttggttaataggaacaagaggatgcttggaaaccttttaggaacg
ttggagaaattccggaaggaagataagcagctatcgacaacggatgcattcatgcgcagg
tcaagttccttacaaagagctgagcaaagggcgcgcgaagaaagtgaaaagctgagggtg
caagagcgagaacaaattgccgaaaaaaggaggcgtgatctgaccctccgagcacgtgta
gctgccaaggcagaagaaaagaaattggagcttctgtttcttcattggactgagcaccat
aaaaagcttaacaatttcttaaggacaaaagcagagcctccaatattttacttgcctacc
aaaccattggttgaggatgagacattggctgcggagcaaaaagagcaggcttttctaaat
tggaagaatgctagaagagaagagctgtccgagtatcagaagcaaattggagaacaatgc
ctcgccaatgtcgaaacagaattagatagatggcaaaacggaaggaatgcaaggaagggg
aacaataaccttatgaacttgcaggagacaatggacaaggagctagaaacccgccaactc
gagtatggccccaagacaactagaaaaatccctgaagaaggtgcaggtgatgatgaagat
gttgaagatataaatgttggtgaagatgacataatcgaagatgtgcttgaggaagtcgaa
gacgataagagaattgacgctgcttaa
DBGET
integrated database retrieval system