Papaver somniferum (opium poppy): 113356284
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Entry
113356284 CDS
T05758
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113356284
Membrane trafficking [BR:
psom04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113356284
Protein recycling
Other Rab GTPase associated proteins
113356284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
Motif
Other DBs
NCBI-GeneID:
113356284
NCBI-ProteinID:
XP_026455167
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All DBs
Position
3:60820207..60824118
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AA seq
482 aa
AA seq
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MENADVFGSSTAPLTWHDFLERMRHPSASDFVKSIKSFIVSFSNNASDPERDSAAVQEFL
ANMEGAFRAHSLWAGCTEEELESAGEGLEKYVMTKLFPRVFASLEEDVKFDEQLFEKMAL
LQQFIRPESLDIKPTFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLHNAS
IASNENPPGADEFLPVLIFVTIKANPSQLHSNLLYIQRYRSQSRLVSEAAYFFTNMLSAE
SFISNIDANAISMDEAEFENNMESARAVLSGLADDSEVSSHSDRDFSRSSRTESLDSKQS
SSNKERNNLLSAMLYRPTPQTSPVKLEAQDSKDKIVKKPSISNLEQTGASELLKEDQMST
AFQDYPYLYAQVGDLTINDVDGLLNSYKQLVLKYVCLSKGMSVTSPLPPLPTSQIQTQTS
TETDYQSEDSRPVEKDEEKHEDMAKKDEVIDEGPVLQAESSESSITEDESSAGQQDAEKE
NT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcggatgtcttcggttcttcgacggctccccttacttggcatgattttctt
gagcggatgaggcatccatccgcctctgattttgtcaaatccattaaaagcttcattgtt
tccttctcaaacaatgcttcggatccggagagagatagtgctgctgtgcaggagtttctt
gcaaacatggaaggtgcatttagggctcattctctttgggctggttgcacggaggaagag
ctagaaagtgctggcgagggattggagaagtatgtcatgactaaattatttcctcgtgta
ttcgcatcacttgaggaagatgtaaagtttgatgagcaactatttgagaagatggcttta
ctacaacagttcattcggccggagagtttggatataaagccaacgttccaaaatgaaaca
tcatggctgcttgctcaaaaagagctacagaagatcaatatgtacaaggcaccaagagat
aaattggtttgtatcctcaattgttgcaaggtcatcaacaacttacttcacaatgcttca
attgcttcaaatgagaatcctcctggagctgatgagttcctccctgtcttaatttttgtc
actataaaggctaatccttcacaattgcattcaaacttgctgtatatacaaagatacagg
tctcaatcgcgattagtctcagaagcagcttactttttcacaaacatgctttctgcagag
tctttcatatcaaacattgatgccaatgccatctcaatggatgaagccgagttcgaaaat
aatatggaatctgctcgtgcagttctatcaggccttgcggatgattctgaagtttcaagt
catagtgaccgagatttcagtcgttcatcgagaacagaatcgttggattccaaacaaagt
tcctcaaataaggaaaggaataatttgctgtctgcaatgctctatcgtcctacaccccag
acatctccagtaaaactcgaggctcaagattctaaagacaaaattgtgaaaaagccctcc
atttcaaatttggagcagacaggtgcatctgagcttttgaaggaggatcaaatgagcact
gccttccaagattatccttacctttatgcacaagttggggatttgacgattaatgacgtg
gatggcctgctcaacagttacaaacaactcgtactgaaatatgtttgtctttctaaagga
atgtctgttacttctccgctccctcctttgcctacatcacaaattcaaacacaaacctcc
actgaaactgactaccaatctgaagacagtagaccagttgagaaagatgaagaaaagcat
gaagacatggctaaaaaagatgaagttatagatgaaggtccagttttacaagctgaaagt
tccgaatccagtattacagaagatgaatcatcagctgggcaacaagatgctgaaaaggaa
aatacatag
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