Papaver somniferum (opium poppy): 113356300
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Entry
113356300 CDS
T05758
Name
(RefSeq) MATH domain and coiled-coil domain-containing protein At3g44800-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113356300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113356300
04121 Ubiquitin system [BR:
psom04121
]
113356300
03036 Chromosome and associated proteins [BR:
psom03036
]
113356300
03400 DNA repair and recombination proteins [BR:
psom03400
]
113356300
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
113356300
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113356300
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113356300
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
113356300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
MATH
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
DUF4865
TRAF_BTBD17
Motif
Other DBs
NCBI-GeneID:
113356300
NCBI-ProteinID:
XP_026455187
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All DBs
Position
3:complement(61505927..61509062)
Genome browser
AA seq
379 aa
AA seq
DB search
MVLVAVVYWVFIKDSAFLWNKHFCCCRNSFQSPQVVTGIFLFQMESVISSLLLAVQNQHA
VNEDDGPWTSSYIWRIENVSKLNEDDHFSPIFSIGPDKWRLLAFRRGCEVNGYLSVYVVA
IKCKNSRNAKFNLAIVDQTYNHNSLRKDTEDQIFRFTEDESDWGFDDFIQLKELKDPRNG
YIVNDACIIECIISAHDSIEDVVFESIERDSAFVCAFCQTSKVSENSGSILHFASRKEVE
EDEASGPNVVHVHQKCAELAPRVYYAGEIVMNLEKELARSSKLKCSCCGLKGAALGCFKR
SCKNTYHAPCALGTSDCQWDDEGHRMLCPSHSGMKFSHEKTKKEKKLVKDNSSAVQRLSM
LKKEKVIAKKKKSRYSRTG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggtactagtagcagtagtttattgggtcttcatcaaagactctgcatttctttggaat
aaacatttctgctgttgcaggaacagctttcagtctcctcaagttgttactgggattttt
ttattccaaatggaaagtgttatttcttcattgcttcttgcagttcaaaatcagcatgca
gttaatgaagatgacggcccctggacttccagttatatatggaggatcgaaaacgtttcc
aaactgaacgaggatgatcatttctctcctattttcagtataggtcctgataaatggcga
ttgctggcatttcgcaggggatgcgaggtcaacggttacttatcagtctacgtggttgca
attaaatgtaagaattcgcgaaatgcgaaattcaatttggccattgttgatcaaacttat
aaccataactcattgagaaaagatacagaagaccagattttccgcttcaccgaggatgaa
agtgattggggttttgatgacttcatacagttaaaggaacttaaagatcctagaaacggg
tatatcgtgaatgatgcttgcatcattgaatgtataatttcagcacatgactctatcgag
gatgtggtatttgaatccattgagagggattcagcttttgtctgtgcattttgccaaacc
tccaaagtatcagagaattctggatcaattttgcattttgccagtagaaaagaagtagaa
gaggatgaggcatctggaccaaatgtggtacatgttcaccaaaaatgcgcagagttggcg
cctagagtttattatgctggtgagattgttatgaacttggagaaggaactggctaggagt
tctaagcttaaatgtagctgctgcgggttaaagggtgcagctcttggatgctttaaacgc
tcctgcaagaatacgtatcacgctccttgtgcattgggtacttctgattgccagtgggat
gatgaaggtcatcgaatgttatgtccaagccattctggtatgaagttttcacatgagaaa
accaagaaggagaagaagctagtgaaagacaattcttcagctgttcaaaggttgagtatg
ctgaagaaagaaaaggtgatagcgaagaagaagaaaagtcgttatagtcggacggggtga
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