Papaver somniferum (opium poppy): 113356314
Help
Entry
113356314 CDS
T05758
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113356314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113356314
Spliceosome [BR:
psom03041
]
Complex A
Other components
Complex A specific factors
113356314
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
113356314
NCBI-ProteinID:
XP_026455209
LinkDB
All DBs
Position
3:62422317..62427268
Genome browser
AA seq
774 aa
AA seq
DB search
MATKVDQASSVEPHRAQTTVMATSSVASASTPKVSMFIKKAGFVIPKNKLAGSLVPAIRP
RKTEARDAAKVEDNKQIKRKTKWGADLSEDAAVRKGRALAYQTRVDQIAQQLKSGVLEEE
DEKGTELLKDAPHPESSRAQKDDQMEKLEMLALEKQEIIGEILKLNPSYKVPPDYKPLLK
EAKIPIPVTRYPGYNFVGVILGPGSHTQKRLEEETGATIQIHGTKVGTGEKGETTSSDGN
DVQIAYEELYVHVSADSFEKIDAAVSLIELLISPVLHGNSATATTDTATGTGNSVNVFDQ
NQKDAVSSAGYVVPMAGVNHGFMQPMAGPSQSGRTQVQFQPYHGPWFPLGPPQPAVHPHS
GYAPSSHMSNAVQCRPTSINTSTVHPSFSGHSQRPFIPGQPQPMQSLQQSYMPELRQQSQ
GFPMLNNPMQSQQNSPAFRAMAPQPNSAMPHQNTGNRPISTGTFSYPSLQHASMRPLTGR
PVTPSGSSVGWSGVSPAASTSQGISSMMRINHPMGPPSEGRSPYPPPSNVPSFTSASTPS
SIAEPTLGSTQLHVPPALSLSQLQQGSILLPVTTPRPQRPNSGDFTFRPLVPPPQASPGS
PSLAPQMLPRPTTLQTSPTQLPSYRPAMNNSSLQVSILSNQSPRAAYQVGQPQALVSFGA
NTAQIPQPQLRFPAFPNPNPMLTSQIPHQGLQMPNSPGNLPPPRTVNHLQLQQNKFGVTI
PSGNLFVQTQQISNNMQGFSPGVWNQGYDPFSPTAVPSSALLNQREDLARKPGS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaaagttgaccaggcatcttcagttgaacctcatcgtgctcagacaactgta
atggccacctcatctgtagcatcagctagtactccaaaagtttccatgttcataaagaag
gctggatttgttataccaaagaataaattagcaggttcgctggttcctgccatccgtcct
aggaagactgaagcccgagatgcagccaaagtagaggataataaacaaatcaaaaggaaa
acaaaatggggtgctgatctctcagaagatgctgctgttcggaaaggaagagctttagca
tatcagactcgagtagaccaaatagcacaacagttgaaatcgggagttctcgaggaggaa
gatgaaaaaggcacagaactactgaaagatgctccacatcctgaatcttctagggctcaa
aaagatgaccagatggagaagcttgaaatgttagcactggagaaacaagagattattggg
gagatactaaagttgaatccgagctacaaggttccaccggattacaaaccactattgaag
gaggccaagattcctattcctgtcacacgttaccctggatacaatttcgttggcgtgata
ttagggcctggaagccatactcaaaagcgtttagaagaggaaactggagctactatacaa
attcatggtactaaagtgggtacgggagagaagggtgaaacaacctcatcagatggaaat
gatgttcaaattgcttatgaggagctatatgtccatgtatcagctgactcgtttgagaaa
attgatgccgcggtttccttaattgaactactcatttccccagtactgcatggaaattca
gcgacggctaccacagatacagcaacaggcactgggaatagtgtgaatgtgtttgatcag
aatcagaaggatgccgttagttctgctggttatgtggtacctatggctggtgttaaccac
ggttttatgcagccaatggcaggaccttcacagtctggtcgcacacaagttcaatttcag
ccataccatggtccatggttcccactaggcccaccccaacctgcagtgcatccccactct
ggttatgccccctcatcacacatgtccaatgctgtccaatgtcgtccaacatccatcaat
acttcaactgtgcatccaagttttagcggtcattctcagcgtccttttattcctggtcaa
ccacagccgatgcaaagtctacagcagtcttacatgcctgaacttcgtcaacaatctcag
ggttttccgatgttgaacaaccccatgcagagtcagcagaactcacctgctttccgtgcc
atggcacctcaacctaattctgccatgccacatcaaaatactggtaatcgaccaatttca
acaggaacgttctcatatccaagtcttcaacatgcatcaatgagaccattgactggtaga
cctgtaactccttctggaagctctgttggatggtcgggtgtatcaccagctgcatcaaca
tctcaagggatatctagtatgatgcgtataaatcacccaatgggtccaccctctgaaggt
cggtctccgtatcccccaccttcaaatgtaccttcttttacatcagcatcaactccctcg
tcaattgctgaacccacattaggttccactcaattacatgttcctcccgcactatcatta
tcccaactgcagcagggaagtattctgctaccagtcacaactccaagaccgcagcgccca
aattctggtgatttcacttttcgacctctggtgcctcctcctcaagcaagtccaggatct
ccatccctagctcctcaaatgctgccaagaccaacaacgctacagacttcaccgactcag
ctgccatcttaccgaccagccatgaacaattcatcattgcaagtaagcattctaagtaat
caaagccccagggctgcatatcaggttggacaacctcaagctctggtttcttttggtgcc
aacacagctcagattccacagcctcaactaagatttccagcatttccaaatccaaatcct
atgctaacatcacaaatcccgcatcagggactccaaatgcccaattcccctggaaatttg
ccgccgcctcggacagtaaatcatcttcaacttcagcagaacaagtttggtgttactatt
ccatcaggcaacctctttgttcaaacccaacaaattagtaataatatgcaagggtttagt
cctggagtttggaatcaaggctacgatcccttctcccccactgcggtaccttcctctgca
ctgctgaaccaaagagaagatttagcaaggaaaccggggagttga
DBGET
integrated database retrieval system
