Papaver somniferum (opium poppy): 113356351
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Entry
113356351 CDS
T05758
Name
(RefSeq) ribosome biogenesis protein bms1-like isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113356351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113356351
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
GTPase
113356351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
GTP_EFTU
AAA
AAA_22
MMR_HSR1
AAA_16
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
113356351
NCBI-ProteinID:
XP_026455248
LinkDB
All DBs
Position
3:65113452..65122485
Genome browser
AA seq
1196 aa
AA seq
DB search
MAVPSSSQEQSHKSHRSRQAGPSAEKKDQTKKRKRDASQEKTHNPKAFAFNSSTKAKRLQ
SRATEKEQRRLHVPTIDRTIGEPAPYVIVVHGPPEVGKSLLIKSLVKHYTKHNLNEVRGP
ITIVSGKQRRLQFVECPNDINGMIDAAKFADVALLLIDGSYGFEMETFEFLNILQVHGFP
KVMGVLTHLDEFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYAKREVHNLAR
FISVMKFHPLSWRAAHPYVLVDRFEDVTPPERVHMDKKCDRNVILYGYVRGCNIKKGTKV
HIAGVGDFPLAGVTSLADPCPLPSAAKKKGLRDKERLFYAPMSGLGDLLYDKDAVYIEIP
DHAVQFSNVDDANGKAVRKGNDRDVGEELVKSLQDTKYSIDEKLKNSGISVFSGNSEDRQ
DDSEEENESDGSDDEDDVDDEGNTDRKLGIVENEDDGSDTEGDGSSDKDGDDDKLHESKP
KVVEQTEFHNGRVRRKAISGSAVDLKDSEDEDGDEDEEDNKDGDGWQSSQDSEFSDQNEE
GHAEDEDDGLGNASKWKESLIERTISRKGANLMEIVYGKVTGKSTTSTAEGHGSSEDEES
EHGEFFYPKEDKAKKSREGLESDEASSEDCSKLLYGGKLKDWKHGETVETIRDRFVTGDW
SKAARRGEASDVNGDDNASLDGEFEDLETGEKYGSHVEPDVSTDAMDNVDPEAEERRLKK
LALRAKFDSREGSESPDEGTESKDGSKFHRPQTNGSEYYEKLKEEVEIRKQRNIDELKDL
DELTRLEIEGFRTGTYLRLEVHDVPYEMVQNFDPCHPILVGGISLGEENAGYMQARLKRH
RWHRKVLKTRDPIIVSIGWRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCLAMFWGPLAPP
NTGVVAVQSVANNQAAFRITATAVVLEFNHATKIVKKIKLVGTPCKIFKKTALIKDMFTS
NLEIARFEGAAIRTVSGIRGQVKKAAKEELGNKPQRKGGQAREGIARCTFEDRILMSDIV
FLRAWTQVEVPRFFNLLTTALQPRDRVWQGMKTVAELRREHNIPIPVNKDSLYKPIERKP
RKFNPTVIPKALQAALPFGSKPKDLRPKKKIPGKLPAVIMEPGERNIRGLVTQLQLLRKE
KMTKKKQKENEKRKALETVKAKEELISKKRQREERRGRYREEDKAKKRKTRRNAES
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccttctagttctcaagaacaatctcataagtcccatagatctcgtcaagct
ggtccttcagctgagaaaaaggatcaaactaagaaaaggaaacgggatgcatctcaagag
aagactcacaatccaaaagcatttgcatttaactcgtcaactaaggcaaagagattacaa
tcacgagctactgagaaagagcaacgcagacttcatgttccgactattgatcgtactatt
ggagaaccagctccatatgttattgtagtgcatggacctcccgaggttgggaagtccctg
ttgattaaatctctagtaaagcattataccaagcataatctaaacgaggttcgaggcccc
attacaattgtatcaggtaaacaaaggcggttacagtttgtagagtgccccaatgatatt
aatgggatgattgatgcggcaaagtttgctgatgtagcgttattactaattgatggaagt
tatgggtttgagatggaaacatttgagtttcttaatatattacaagttcacggctttcca
aaggttatgggggtgcttacacatctggacgagttcaaagatgtgaaaaaacttagaaaa
accaagcagcgcctcaagcatcgtttctggactgaaatctatgatggagcaaaattgttt
tacttatctggtctcatccatgggaagtatgccaaacgtgaagttcataatctggcaaga
ttcatatcggttatgaaatttcatcctttgtcatggcgagctgcacatccgtatgtgctg
gtagatcgttttgaagatgttactcctccagaaagagtgcacatggacaaaaaatgcgac
aggaacgtaattttgtatggttatgttcgaggttgtaatattaagaaaggaaccaaggtg
catattgctggtgttggtgatttcccactagctggtgttacaagcttagccgatccttgc
cctctaccttctgctgctaaaaaaaaggggttgcgggacaaggaaagactcttttacgcg
cctatgtctggtcttggggatcttctatatgacaaggatgcagtatacatagaaattcct
gatcacgctgttcagttttctaatgttgatgatgcaaacgggaaagctgttcgaaaagga
aatgaccgtgacgtgggcgaggagttggtaaaatcacttcaagatactaaatactcaatt
gatgagaaattgaaaaacagtggtatttctgtttttagtggtaattcagaagatagacaa
gatgactccgaggaagaaaatgaatccgatgggtctgatgatgaagatgacgtggatgac
gaaggcaacaccgacagaaagcttggaattgttgaaaatgaggatgatggttctgataca
gaaggcgatggctcttcagataaagatggggatgatgataagttacatgaatcaaaacct
aaggtagtagagcaaactgagttccacaatggaagggtaagaagaaaagctatctctgga
agtgctgttgatctgaaggattctgaggatgaagatggagatgaagacgaggaggacaac
aaagacggtgatggttggcagtcatctcaagattcagaattttcagatcagaacgaagag
ggccatgcagaagatgaagatgatgggttgggaaatgcctccaagtggaaagaatccttg
atagagagaaccatatcaaggaaaggtgctaatctcatggaaattgtatatgggaaagtt
acggggaagtcaacaacctccaccgctgaaggacatggtagtagtgaagatgaagaaagt
gagcatggtgaattcttttatccaaaagaagataaagcgaagaaatcaagggaaggactg
gagagtgatgaggcttcttctgaggattgctctaaattattatatggtggaaagcttaaa
gactggaaacatggagaaacggttgaaactattcgtgaccgctttgtcactggagattgg
tccaaggcagctcgtagaggtgaagcctctgatgtgaatggtgacgataatgcttctctt
gatggtgagtttgaagatttagaaacaggagagaagtatgggtcccatgtagagcctgat
gtatcaacggatgcaatggataatgttgaccccgaagctgaggagcggaggcttaaaaag
ctggcactgcgtgcaaaatttgattcgcgtgaaggttctgaatcgccagacgagggcact
gaatcaaaagatgggtccaagttccaccggccacaaactaatggttctgaatattatgaa
aagttgaaggaggaggttgaaattcgaaaacagaggaatatagatgaactcaaagatctt
gatgagctaacccgattggagattgagggctttagaacggggacttatttgaggttggag
gtgcatgacgttccttatgagatggttcagaattttgatccttgtcatcctattcttgtt
ggaggtatcagtctgggagaggaaaatgctggatatatgcaggcgagactgaaacgacat
agatggcataggaaggtattgaagacaagagatccaatcattgtttcaattggttggaga
cgttaccagaccacacccatttatgccattgaggacagcaatggaaggcatcgaatgctt
aaatacacacccgaacacatgcactgtcttgctatgttctggggccctcttgcacctccc
aataccggagttgttgctgtacagagtgtggcaaacaaccaggcagcatttcggattaca
gcaactgccgtcgtacttgaatttaaccatgccacaaagatagtgaagaaaatcaagcta
gttggaactccctgcaagatcttcaagaaaactgctcttatcaaggacatgtttacatcc
aatcttgaaatagctaggtttgagggtgcagcaattcggactgtgagtggaattcggggg
caggttaaaaaggctgcaaaagaagagcttggtaataaaccgcaaaggaagggaggtcaa
gctagagaagggattgctagatgcacatttgaagacaggattcttatgagtgatatcgtt
ttcttgcgtgcgtggactcaagttgaggttcctcgtttcttcaacctgttaacgacggcc
ttgcaacctcgtgatcgtgtctggcaaggcatgaaaacagtagctgagctgcggcgagag
cataatatccctattcctgttaacaaggattcactctacaagccaattgaacggaaacca
agaaagtttaatccgacggtaatccccaaagcactccaagctgcactcccattcggatca
aaacccaaggatcttcgtcctaagaagaagattcctggaaagctacctgctgtgatcatg
gaacccggggagcgcaacattcgtggtcttgtcactcaacttcagctgttgagaaaggaa
aagatgactaaaaagaagcagaaggaaaacgagaagagaaaagcacttgagacggtgaag
gccaaggaagaactgatatcaaagaagcgtcaaagggaagagagaagaggaagatataga
gaggaagataaagcgaagaagaggaaaactcgtcggaatgcagaatcttaa
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